Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0475 ATGCGGGTCCCAATCTTCATATTTGCACATCACTTCACTCGAAAGCAGACTGATTTAAGACAAGGTTGTTTGATAGGAGGTGTTCTCCTCAAGTCGTCAACGTCTACGCAACTGTGCTATCCTCACCGTTGTGATATTCTGTACTCGCCCTTCTTGTCGTCGTGGTCACATCTGTTCCGTTTGTCACCTCTGCGCGTACGAGTCTGCTTCTCATCCGGGCTCCATTCCCTGGTTGGCTTGAGGATGGAGGGCAGGAATGGTTTGTTTGGTGGTTGCGAGGAAGTTGGGAATGCAAGTGGAGAAATTTGCAAAAATGATAGCGCAGAGAATGGTTGTGACAGTGAAGCTTGTCAGCCCAGTTTAGATGATGATGCATCAGATTATGGAGACGTCATGGGTCTCACAGCAGAAGATATATGTAAGAAGGTCTTTCGGAGCGAGGAACGTGCTTATGATTTCTTCGCAAAAGTTGGAAAATTTATTGGGTTTGGGGTCCGAAAGGGTGACTACGGGAAAGATGAGGAGGGGAATTTGATAAGGCGGAGATTCTTTTGCAACAAGGCCGGTTTAAGGGACCAGAAGCATTACAATCGGGTGGATAGAAAAAGATCACATCGTCCGGAAACGCGCACGAATTGCAAGGCAATGCTGTTAGTGTATCTTGATAGAGTTTCTTGCACTTGGAAGGTTAGGAAGGTGAACCTGGAACATAATCACCCACTGACGCCCAGGATAATGGTACACATGATTCCATGA 756 0.4669 MRVPIFIFAHHFTRKQTDLRQGCLIGGVLLKSSTSTQLCYPHRCDILYSPFLSSWSHLFRLSPLRVRVCFSSGLHSLVGLRMEGRNGLFGGCEEVGNASGEICKNDSAENGCDSEACQPSLDDDASDYGDVMGLTAEDICKKVFRSEERAYDFFAKVGKFIGFGVRKGDYGKDEEGNLIRRRFFCNKAGLRDQKHYNRVDRKRSHRPETRTNCKAMLLVYLDRVSCTWKVRKVNLEHNHPLTPRIMVHMIP* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0475 251 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 135 245 - -
Amo16g0475 251 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 135 245 - -
Amo16g0475 251 Pfam FAR1 DNA-binding domain 153 242 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0475 Amo-Chr16 8031655 8033909 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo16g0475 FAR1 5.1e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0475 - - ahf:112701370 347.051