Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0470 ATGGAGAATTATAATAATGAGGAAATCCCATCAGCGCCATCAACACGAGCCACACGAGGGACTCCAGGTGCACCTCTCTTCGGAGGTTTCAGATCCATCAACAATAATGGTAGGAGCAGACTTCGTTGGCACATTTATGCTGATGTTCGCCGGAACAACGGCGGCAATAACAAACGAGAAGACCAATGGATTGGAAAGTCTGATGGGCTGCGCTGTCGTCTTGCGGTGACGGTGATCATCCTGTCCACCGGACACATATCCGGTGCTCATCTGAACCCCGCTGTCACCGTATCATTTGCTGCCTTAAAGCACTTCCCTTGGAAGAAGGCACAGATATTGGCATCAGTGTGTGCCGCATTTGCACTGAAGGGAGTGTATCATCCATTCATTGGGGGGTGGAGGATATGGCCAAGCTTTTGCTTTAGAATTCATCATCATTCATCAGCTTTAATCTCATGTTTGTTGTCACTGCTTTCAATATTATATATCACGAGTTCTTACATTCTTTCATGGGAAGTGCTTCAAAGCAGCAAAGGAAATGGTGACAGCAGGGTTGAGATGAGCACCGGATATGTGTCCGGTGGAGAGGATGATCACCGCCACTGCAAGCCGGTGATGACAGCGCAGCCCATCAGACTTTCCAATCCATTGGTCTTCTCGTTAATTATTGCCACCGCTGTTCTGGCGAACATCAGCATAAAGGTGCGAACCAACTCTGCTCCTACCTAA 729 0.4815 MENYNNEEIPSAPSTRATRGTPGAPLFGGFRSINNNGRSRLRWHIYADVRRNNGGNNKREDQWIGKSDGLRCRLAVTVIILSTGHISGAHLNPAVTVSFAALKHFPWKKAQILASVCAAFALKGVYHPFIGGWRIWPSFCFRIHHHSSALISCLLSLLSILYITSSYILSWEVLQSSKGNGDSRVEMSTGYVSGGEDDHRHCKPVMTAQPIRLSNPLVFSLIIATAVLANISIKVRTNSAPT* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0470 242 PANTHER AQUAPORIN NIP2-1 73 139 IPR034294 -
Amo16g0470 242 PANTHER AQUAPORIN NIP2-1 6 33 IPR034294 -
Amo16g0470 242 MobiDBLite consensus disorder prediction 1 31 - -
Amo16g0470 242 Gene3D Glycerol uptake facilitator protein. 56 174 IPR023271 -
Amo16g0470 242 SUPERFAMILY Aquaporin-like 74 143 IPR023271 -
Amo16g0470 242 PANTHER BNAA02G36290D PROTEIN 6 33 - -
Amo16g0470 242 PANTHER BNAA02G36290D PROTEIN 73 139 - -
Amo16g0470 242 Pfam Major intrinsic protein 74 129 IPR000425 GO:0015267|GO:0016020|GO:0055085
Amo16g0470 242 MobiDBLite consensus disorder prediction 1 18 - -
Amo16g0470 242 ProSitePatterns MIP family signature. 90 98 IPR022357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0470 Amo-Chr16 7929066 7929954 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0470 5 138 Major Intrinsic Protein MIP AT1G80760 42.932 6.77e-29 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0470 K09874 - qsu:112009900 122.479