Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0461 ATGACAATGCAATTTTTGAATAAAAAAAGATACACTTCAACCCCTGACCTTATACTCTGTCTGCGCAGCGTCGGAGAAGCTCTTGGTTCCAACACACAAAACACAGCCAAAGCTGCAATGGGGATCGATATTAAGGCTGGCGGCAAGAGCAAAAAGACCAAAAGGACCGCACCCAAGTCCAATGATATCTACCTCAAGCTCCTCGTCAAGCTTTACCGCTTCCTTGTGAGGAGGACCGGCAGCAATTTCAATGCCGTGATACTGAAGCGCTTGTTCATGAGCAAGGTTAACAAGCCTCCGCTTTCTTTGTCACGCTTGATTAAGTTCATGAAGGGCAAGGAAGGTAAAATTGCCGTTGTAGTGGGAACTGTAACCGATGATATCAGAGTGTATGAAGTTCCTGCATTGAAGGTTACTGCACTCAGGTTTACAGAGACTGCACGTGCTAGAATAGAGAAGGCTGGTGGTGAATGCTTGACATTTGATCAGCTTGCACTTAGGGCTCCTCTCGGACAGAACACGGTCCTTCTTAGAGGCCCAAAGAACTCCAGGGAAGCTGTGAAACACTTTGGTCCTGCTCCTGGTGTTCCTCACAGCCATACCAAGCCTTATGTACGATCTAAGGGAAGGAAGTTTGAGAGGGCTAGAGGAAGGAGGAACAGCAAAGGATTTAGGGTTTAA 681 0.4699 MTMQFLNKKRYTSTPDLILCLRSVGEALGSNTQNTAKAAMGIDIKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIKFMKGKEGKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGRRNSKGFRV* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0461 226 Gene3D - 40 226 - -
Amo16g0461 226 PANTHER 60S RIBOSOMAL PROTEIN L18-1-RELATED 40 225 - -
Amo16g0461 226 Pfam Ribosomal protein 60S L18 and 50S L18e 41 226 IPR021131 -
Amo16g0461 226 MobiDBLite consensus disorder prediction 190 226 - -
Amo16g0461 226 MobiDBLite consensus disorder prediction 203 226 - -
Amo16g0461 226 PANTHER 60S RIBOSOMAL PROTEIN L18 40 225 IPR000039 GO:0003735|GO:0005840|GO:0006412
Amo16g0461 226 SUPERFAMILY Ribosomal proteins L15p and L18e 59 178 IPR036227 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0461 Amo-Chr16 7439475 7443105 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0461 42 226 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 79.032 1.24e-105 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0461 K02883 - csv:101209626 355.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0461 16 7439475 7443105 Amo16g0461 16 7439475 7443105 ECH