Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0453 ATGGCTTTGCTTAATCTCTTTTTCATCTTCATGCTTTTACCCTCATCATTTGAGGCTTCACTTTCATCAGGCATCGAAACCCAAGACCTGAACTCCATGATTGCACAAGCCTGCATGAACATCGAAAACCAAAACTCATGCCTCGCCAACATCCAAAACGAGCTCGTCAAGATCGGCCCRCCAAGCCCCACTTCCGTGTTGAGRGCKGCACTCGGTGCCACGATCAACGAAGCCAGGGGGGCCATCGACAAGATCACAAAGTTCACSACGTTCTCSGTGAGCAACCGCGAGCAACTAGCCATAGAAGACTGCAAGGAGCTTCTAGACTATTCCGTTTCGGAGCTGGCATGGTCCATGGGAGAGATGAGAAGAATCCGTGGCGGAGATACAAGCGCGCAATACGAGGGAAACCTGGAAGCTTGGCTAAGTGCAGCTCTGAGCAACCAAGATACTTGCATTGAAGGGTTTGAAGGTACGGACAGGCGCCTCGAGAGTTACATAAGCGGAAGCTTAACGCAAGTTACGCAGCTTATAAGCAATGTGTTATCCCTCTACACTCAACTCCATAAATTACCATTCAGCCCTCCCAGAAAGACTAATACTCTTAATGTCACGACGGTTGTTGATGAGTTTCCCGACTGGATGAGCGACGGTGACGAGCAGCTGCTTAAGGCGAAGTCGCCCCCGCATGGTCGTGCGGACGCTGTGGTGGCGTTGGATGGGAGTGGGCATTTCCGGAGCATCATGGAGGCCGTTAATGCGGCTCCGAGTCATAGTAACACGAGGTATGTCATATACGTGAAGCAGGGGTTGTACAGGGAAAACGTTGATATGAAGAAAAAGATGACCAACATTATGCTCGTTGGTGATGGTATTGGCAGAACCATTCTCACCAGCAACCGCAACTTCATGCAAGGATGGACCACTTTTAGAACTGCTACACTTGCTGTATCCGGGAAGGGATTCATTGCAAGGGACATGACATTCCGCAACACAGCTGGACCAGTGAACCACCAAGCAGTGGCACTTCGTGTGGACTCTGACCAATCAGCGTTCTACAGGTGTAGCATCGAAGGATTCCAAGACACACTTTACGCTCACTCACTGCGTCAATTTTACCGCGAATGTGAAATTTACGGTACCATTGACTTCATCTTTGGCAACGGTGCAGCAGTGTTGCAAAACTGCAAGATCTATACGAGAGTCCCTCTCCCGTTACAAAAGGTTACCATCACGGCCCAAGGAAGAAAAAGCCCACACCAAAGCACAGGCTTCACAATCCAAGATAGCTTTATTCTAGCAACTCAGCCCACTTATCTGGGCCGGCCCTGGAAGGAGTACTCAAGAACAGTTTACATAAACACCTACATGAGTGCGCACGTGCAGCCTCAAGGMTGGCTTGAGTGGTTTGGGAACTTTGCATTGYARACATTGTGGTACGGTGAGTATAGGAARTATGGGCCTGGGTCAGCCCTTGGTGGAAGGYTCAAATGGCCCGGGTATCATGTTATTAAGAATCCTGCTGCAGCTAGTTACTTTACGGTTCAGAGGTTCATTAACGGTAACTCATGGTTGCCAAGGACAGGTGTCAAGTTCACTTCAGGCTTGACCAATTGA 1617 0.4904 MALLNLFFIFMLLPSSFEASLSSGIETQDLNSMIAQACMNIENQNSCLANIQNELVKIGPPSPTSVLRAALGATINEARGAIDKITKFTTFSVSNREQLAIEDCKELLDYSVSELAWSMGEMRRIRGGDTSAQYEGNLEAWLSAALSNQDTCIEGFEGTDRRLESYISGSLTQVTQLISNVLSLYTQLHKLPFSPPRKTNTLNVTTVVDEFPDWMSDGDEQLLKAKSPPHGRADAVVALDGSGHFRSIMEAVNAAPSHSNTRYVIYVKQGLYRENVDMKKKMTNIMLVGDGIGRTILTSNRNFMQGWTTFRTATLAVSGKGFIARDMTFRNTAGPVNHQAVALRVDSDQSAFYRCSIEGFQDTLYAHSLRQFYRECEIYGTIDFIFGNGAAVLQNCKIYTRVPLPLQKVTITAQGRKSPHQSTGFTIQDSFILATQPTYLGRPWKEYSRTVYINTYMSAHVQPQGWLEWFGNFALXTLWYGEYRKYGPGSALGGRXKWPGYHVIKNPAAASYFTVQRFINGNSWLPRTGVKFTSGLTN* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0453 538 PANTHER PECTINESTERASE 6 536 - -
Amo16g0453 538 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 189 IPR035513 -
Amo16g0453 538 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 22-RELATED 6 536 - -
Amo16g0453 538 TIGRFAM PME_inhib: pectinesterase inhibitor domain 2 189 IPR006501 GO:0004857
Amo16g0453 538 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 189 IPR035513 -
Amo16g0453 538 SUPERFAMILY Pectin lyase-like 233 535 IPR011050 -
Amo16g0453 538 Pfam Pectinesterase 234 522 IPR000070 GO:0030599|GO:0042545
Amo16g0453 538 CDD PMEI-like_3 37 190 - -
Amo16g0453 538 ProSitePatterns Pectinesterase signature 2. 378 387 IPR033131 -
Amo16g0453 538 Pfam Plant invertase/pectin methylesterase inhibitor 33 184 IPR006501 GO:0004857
Amo16g0453 538 Gene3D - 230 536 IPR012334 -
Amo16g0453 538 SMART PMEI_2 29 184 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0453 Amo-Chr16 7298451 7301119 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0453 1 538 Carbohydrate Esterase AT3G05620 60.436 0.0 687
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0453 K01051 - gmx:100810565 907.131