Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0450 ATGTGCTTCGGCACATTAGAAGATGCGCGTGCATATTATTACCGATATGCGAGGGTGGTTGTTAATCAAGCTTTGCATTGTAACAGAGATGGATACCGCACATCCCGTGTAAAGGCACCCCAGAGAAGGAAAACAGTGGCCTCAACAAACTGCAAAGCCCGTTGCTATTTGGCATTAGATAAAATGACAGGGCAGTGGAGAATTTCTCGAGTAGAGGTATCRCACTCACACCRGCTTAATCCGAAGCTATCTGGKATGTTCTCAGCAAACCGTCAGCTAAGTATGCATGTGAAGGACCTGATACAGCAAAATGACCAAGCTGGCATTAGACCGAGTAAGACGTACCAGGCACTAGCCAATGCAGTCGGTGGCCCTGCCAACCTCACCTTTACAGAGAAGGATGTTAGAAATTACATTAGTCGTCACTTACGCATTTCCGGGGATGAGACGGATCCAAAAGAGTTACTTAAGCACTTCTCACGGATGAAGGAGCTCAATCCAAACTTTTTCTTTGAAATAGATGTGGATGAAAACCATAGCATTAGAAATGTGTTTTGGGCCGATGCTCGGTGTAGAGCTGCATGA 585 0.4547 MCFGTLEDARAYYYRYARVVVNQALHCNRDGYRTSRVKAPQRRKTVASTNCKARCYLALDKMTGQWRISRVEVSHSHXLNPKLSGMFSANRQLSMHVKDLIQQNDQAGIRPSKTYQALANAVGGPANLTFTEKDVRNYISRHLRISGDETDPKELLKHFSRMKELNPNFFFEIDVDENHSIRNVFWADARCRAA* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0450 194 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 20 193 - -
Amo16g0450 194 Pfam FAR1 DNA-binding domain 14 81 IPR004330 -
Amo16g0450 194 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 20 193 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0450 Amo-Chr16 7285276 7285920 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo16g0450 FAR1 9.9e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0450 - - ahf:112805526 369.777