Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0448 ATGGGGCATTTATCTTCTATGTTGAATGGTTTGGCGAGGTGGAAGAAGGGAAAAAGTTCTGGCAGATGTGTCGGTAGAGATGCTGCTGAAGCTATGGCAAGGGAAGCCAAGAAAAATGACTTGATTCTATGCAGTTCCGGCACTGTCAATGTTGATGGTTCAAAGAACTATGCCTCAATCTTTTCCAAGAAAGGCCAGAAAGGTGTGAACCAAGATTGCTGTGTAGTCTGGGAGGAATATGGGTGCCAAGAGGACATGATATTCTGTGGGATATTTGATGGGCATGGGCCATGGGGTCACTTTGTGGCAAAGAAAGTGAGAGAGACAATGCCATCATCTTTGCTATGCAATTGGCAGGAGGCACTTGCACAATCTCCTCTTGATCCTGAGATTGATGTTGAGCAAGAGAAGAAGCAGAACCGTTTCAACATATGGAAGCACTCTTACTTGAAGACTTGTGCTGCCATTGATCAAGAACTCTTTCGCTACCGCAAGATCGACTCCTTTTACAGTGGAACCACTGCTCTTTCAGTTGTTAGACAGGGTGAACTCATCGTTATAGCAAATGTAGGTGATTCCCGTGCTGTGTTAGCTACATCATCAGATGATGGAAGTTTGGTTCCAGTTCAATTAACAGTTGATTTCAAGCCCAATTTGCCCCAGGAGGCAGAGAGAATATTGCAGTGCCAGGGGAGGGTGTTCTGCTTACATGATGAACCAGGGGTGCATAGGGTGTGGCTGCCGGACGAGGACTCGCCGGGACTCGCCATGTCGAGGGCTTTTGGTGATTACTGCATCAAAGATTATGGTATTATATCAGTACCTGAGGTCACACACAGACATATAAGCACCAAAGACCAGTTTGTTGTGCTAGCCACTGATGGGGTTTGGGATGTGATCTCCAATGAAGAAGCAGTGGACATTGTATCATCAACAGCGGAGAAATCAAAGTCGGCGAAGCGATTGGTGGAGTGCGCGGCGCACGCATGGAAGCGCAAGAGGCGGGGGATAGCCATGGATGACATTTCAGCTATTTGTCTCTTCTTCCATTCTTCTTCTTCACCTCACCAAGTTACCTCACTTGCCACTCTAAAATAG 1098 0.4681 MGHLSSMLNGLARWKKGKSSGRCVGRDAAEAMAREAKKNDLILCSSGTVNVDGSKNYASIFSKKGQKGVNQDCCVVWEEYGCQEDMIFCGIFDGHGPWGHFVAKKVRETMPSSLLCNWQEALAQSPLDPEIDVEQEKKQNRFNIWKHSYLKTCAAIDQELFRYRKIDSFYSGTTALSVVRQGELIVIANVGDSRAVLATSSDDGSLVPVQLTVDFKPNLPQEAERILQCQGRVFCLHDEPGVHRVWLPDEDSPGLAMSRAFGDYCIKDYGIISVPEVTHRHISTKDQFVVLATDGVWDVISNEEAVDIVSSTAEKSKSAKRLVECAAHAWKRKRRGIAMDDISAICLFFHSSSSPHQVTSLATLK* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0448 365 ProSiteProfiles PPM-type phosphatase domain profile. 57 349 IPR001932 -
Amo16g0448 365 SUPERFAMILY PP2C-like 53 350 IPR036457 -
Amo16g0448 365 CDD PP2Cc 56 349 IPR001932 -
Amo16g0448 365 Pfam Protein phosphatase 2C 81 323 IPR001932 -
Amo16g0448 365 Gene3D - 41 352 IPR036457 -
Amo16g0448 365 SMART PP2C_4 49 347 IPR001932 -
Amo16g0448 365 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 1 357 - -
Amo16g0448 365 PANTHER ALPHABET, ISOFORM E-RELATED 1 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0448 Amo-Chr16 7212168 7215857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0448 1 350 PP2C-type Phosphatase Gene Family AT3G05640 70.986 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0448 - - gmx:100808955 636.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0448 16 7212168 7215857 Amo19g1567 19 37044955 37049474 PCT
Amo16g0448 16 7212168 7215857 Amo09g0988 09 20825630 20830457 PCT
Amo19g1567 19 37044955 37049474 Amo16g0448 16 7212168 7215857 PCT
Amo09g0988 09 20825630 20830457 Amo16g0448 16 7212168 7215857 PCT