Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0445 ATGAGCAAGGGTGAATTATCATCAAGGACAAGGATGAAAGCTCCGCCGGTTGCGTTGGCGACTCTGATTGGCCGTGAGCTTCGAAATGATAAAGTTGAGAAGCCTTTTGTGAAGTACGGGCAAGCTGGCTTGGCCAAGAAAGGAGAAGATTACTACCTAATTAAGACAGATTGCCAGAGGATTCCTGGGGATCAATCGACAGCGTTTTCTGTCTTCGCGATATTCGATGGGCATAATGGTATATCAGCTGCTATTTTTGCAAAGGAAAACTTGCTAAACAATGTTCTGAGTGCAATACCGCAAGACATCAGCAGGGATTCGTGGCTTCAGGCTCTTCCTCGCGCCCTTGTTGTTGGTTTTGTGAAAACTGACATAGAATTTCAGCAAAAGGGAGAAACTTCTGGAACAACTGCTACGTTTGTTCTGATTGATGGATGGACTGTCACTGTTGCATCTGTTGGGGATTCCCGCTGCATTCTAGATACTCAGGGAGGTGTAGTTTCTCTCTTGACAGTTGACCACAGACTAGAAGAGAATGAAGAAGAGAGGCAGCGCGTTACTGCCAGTGGTGGTGAAGTAGGAAGACTCAATGTTTTTGGAGGCAATGAGGTAGGGCCTCTTCGCTGCTGGCCTGGTGGATTGTGCCTATCTAGATCAATAGGTGATACAGATGTTGGAGAATTTATTGTGCCAATACCGCATGTTAAGCAAGTGAAGCTGTCAAATGCTGGCGGAAGGCTTATCATAGCTTCTGATGGCATTTGGGATGCTTTATCTTCTGATATGGCTGCCAACTCATGTCGGGGTCTACCTGCAGAGCTTGCAGCAAAGCTAGTGGTTAAGGAAGCTCTAAGGTCCAGAGGCCTGAAGGATGATACAACTTGCCTTGTTGTAGATATTATTCCTTCTGACCTTCCTGTATTACCACCAATTCCAAGAAAGAAACATAATATGCTAACTTCGATTCTCTTTGGAAAGAAATCTGAGAATTCCTCGAATAAATCTACTAATAAGCTTTCTGCAGTTGGTGTTGTGGAGGAGTTATTTGAAGAGGGCTCTGCAATGCTTGCTGAAAGGCTGGGTAAGGATTTCCCGTTGAATAAGAATTCTGGGATTTTTCGCTGTGCTGTTTGCCAGGTGGATCAAACACCTGGTGACAGCTTATCTGTAAACTCCGGCCATTTTTTCACTCCAGCATCTAAACCATGGGAAGGTCCATTCCTCTGCACAAATTGTCGGAAGAAGAAAGATGCTATGGAAGGAAAAAGACCCACAGTGACAGCATAA 1287 0.4491 MSKGELSSRTRMKAPPVALATLIGRELRNDKVEKPFVKYGQAGLAKKGEDYYLIKTDCQRIPGDQSTAFSVFAIFDGHNGISAAIFAKENLLNNVLSAIPQDISRDSWLQALPRALVVGFVKTDIEFQQKGETSGTTATFVLIDGWTVTVASVGDSRCILDTQGGVVSLLTVDHRLEENEEERQRVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEFIVPIPHVKQVKLSNAGGRLIIASDGIWDALSSDMAANSCRGLPAELAAKLVVKEALRSRGLKDDTTCLVVDIIPSDLPVLPPIPRKKHNMLTSILFGKKSENSSNKSTNKLSAVGVVEELFEEGSAMLAERLGKDFPLNKNSGIFRCAVCQVDQTPGDSLSVNSGHFFTPASKPWEGPFLCTNCRKKKDAMEGKRPTVTA* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0445 428 Pfam Protein phosphatase 2C 65 282 IPR001932 -
Amo16g0445 428 SMART PP2C_SIG_2 54 300 IPR001932 -
Amo16g0445 428 Gene3D - 36 304 IPR036457 -
Amo16g0445 428 PANTHER ALPHABET, ISOFORM E-RELATED 8 426 - -
Amo16g0445 428 ProSiteProfiles PPM-type phosphatase domain profile. 35 300 IPR001932 -
Amo16g0445 428 SUPERFAMILY PP2C-like 41 300 IPR036457 -
Amo16g0445 428 CDD PP2Cc 46 300 IPR001932 -
Amo16g0445 428 PANTHER PROTEIN PHOSPHATASE 2C 5-RELATED 8 426 - -
Amo16g0445 428 SMART PP2C_4 26 298 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0445 Amo-Chr16 7163256 7166625 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0445 6 425 PP2C-type Phosphatase Gene Family AT1G09160 77.143 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0445 - - gmx:100807886 771.541
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0445 16 7163256 7166625 Amo16g0445 16 7163256 7166625 ECH