Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0431 ATGGCACTAAACAAGCGAGCATCGTCATGCAATGAGGGAAATGATGAGAGAGACCTTCAAGTCTCTCTTTGTAAACGAAAAGCAGTGCCAGACACCCGCACTGCTTCCGGTATTAGTTCCACCAATGACATGGCGTTCCTCCGGGAATCTAAATTTAAGAGAGTGTTAGAACAGGTTATTCCATCAATGCTAGAACAGGCAATTCCGCCTATGTTAGAAAAGGTGATTCCGCCTATGCTAGAACAGATGATTCCACCTATGCTGCACCGTTCGCTATCTTCCCCATGTCATGGATTTTTGGTCAAGCGGAAGACTAGTCCAGCAGCAGGTGGAGGCAGATCATTGCAGTTATGTCTGATGAAAGGGTTGCCTTCAACCATTTTCACACACATCAACATCAGAGCGGAGGACAGTTCCACGCTCCAAGTTGCGGTGTGCGATGCCACAGTTCAGCACTCCAAGGTCACCATGGGAGATGGTCCCTCCTTGAAGGTCCAGCTATGCGTCCTGAGGGGTGACTTTGAAATTGAGGATTGGACTGCTGAGGAATTCAATAGCAACATAGAAAGTCAAAGAGAAGGAAAAGGACCATTGCTCAAGGGAGACACGGTTATTACCATTGAAAATGGAGTTGGCTTTTTCAAGAATGTTGAGTTTACTGATAACTCTTGCTGGACCAGAAGTGGCAAGTTCCGGATTGGAGTTAGAGTACTGCATTCGAATTCTCCCGCTGTAGCAGACATCAAAGAAGGAAGAAGTGAGCCTATAAGGGTGAAGGATAAGCGAGGAGTCGCAAATCAGAAACCGGATCGTCCTTCATTAGATGACAAGGTGAGTTGTCTGCATAAGATCTCGAAATATGGTCAGATCTGCAGGCAGTTGTCAGACGACGGAATTAAAACTGTCAAGGATCTGTTGCGCTTGCTCACAACTGACCAAGCTTCACTAAAACAGATTGCGGGGAAGTATTGGGAGAAGATTATTGAGCATGCTAAGTCTTGTGAGATAGATAAAAATGAGCGCTACATCTACCAGTATTTCACAAGAACAGCAGAGCAACCAAAAGCAATATCCCTGCTCTTAAATTGCATCTATGAGCCTGTGGCTATTTCATATGATGGCCAAAATTTTTGCAGTGTAGAGTGTTTGGATGCGGAAGGCAAGCGTTGCGTGGAAACAATAAAGCAGGATGCATACAAGAACCTGAATGATTTGAAACCATTTGAAGCAAGTTCGAGGAACACCGGTGTTGTAGGGGAAGGGCAAGGACATATGGTTCAACCATGGGCAATCGGTGGAGGCGAACAAGTAGGGTGTTCCAGTAAACAACTGCTATATGAGGCCAAATGGGAAGAGTACATGAATCCATTACAGCTTGATCAGTTTCTAATAAATTACCCCTTGAACTCTGATGGAGGTGATTATGGGGCAAAATCATTCGACTAA 1446 0.4502 MALNKRASSCNEGNDERDLQVSLCKRKAVPDTRTASGISSTNDMAFLRESKFKRVLEQVIPSMLEQAIPPMLEKVIPPMLEQMIPPMLHRSLSSPCHGFLVKRKTSPAAGGGRSLQLCLMKGLPSTIFTHINIRAEDSSTLQVAVCDATVQHSKVTMGDGPSLKVQLCVLRGDFEIEDWTAEEFNSNIESQREGKGPLLKGDTVITIENGVGFFKNVEFTDNSCWTRSGKFRIGVRVLHSNSPAVADIKEGRSEPIRVKDKRGVANQKPDRPSLDDKVSCLHKISKYGQICRQLSDDGIKTVKDLLRLLTTDQASLKQIAGKYWEKIIEHAKSCEIDKNERYIYQYFTRTAEQPKAISLLLNCIYEPVAISYDGQNFCSVECLDAEGKRCVETIKQDAYKNLNDLKPFEASSRNTGVVGEGQGHMVQPWAIGGGEQVGCSSKQLLYEAKWEEYMNPLQLDQFLINYPLNSDGGDYGAKSFD* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0431 481 Pfam Calmodulin binding protein C-terminal domain 355 407 IPR046829 -
Amo16g0431 481 PANTHER CALMODULIN-BINDING PROTEIN 60 G 47 412 - -
Amo16g0431 481 Pfam Calmodulin binding protein central domain 273 334 IPR046830 -
Amo16g0431 481 PANTHER OS02G0177800 PROTEIN 47 412 IPR012416 GO:0005516
Amo16g0431 481 Pfam Calmodulin binding protein-like N-terminal domain 115 261 IPR046831 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0431 Amo-Chr16 6908339 6910449 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0431 48 405 Calmodulin-binding Proteins AT5G26920 36.264 6.39e-60 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0431 - - aip:107645945 967.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0431 16 6908339 6910449 Amo16g0431 16 6908339 6910449 ECH