LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo16g0430	ATGGCACCAAACAAGAGAGGATCATCAAGCGATGAGGGTAATGATGACAGAGACCTTCAACTCCCTCTTTGTAAACGAAAAGCAGCACTACCAGACAGCCGTATTTCTGCTTCCGGTAGTGGTTCCACCAATGACATGGCGTTGATCTTGGAACCTGTAATTCGGAAAGTGTTACAGGAGATGATGCCACCTATGCTAGAACAGGTGATGCCACGTATGTTAGAACAGGTGATTCCACCTATACTGCAGCGTTACCTACCTTCCCCATGTGATGGATTATCGGTCAGGGGGCAGATTAGTCCAGCAGCAGGTAGAGGCAGATCATTGCAGTTATGTCTGATGAAAGGGTTGCCTGCAACCATTTTCACACAGATCAACATCACAGCAGAGGACAGTTCCCCGCTCCAGGTTGCGGTGTGTGATGCAACAATTCAGAACAGCAAGGTAACAAAGGGAGATGGTCCCTCCTTGAAGGTCCAGCTGTGTGTCCTGAAGGCTGATTTTGAAAGTGAGGATTGGACTGCTGAGGAATTCAATAGCAACATAGAAAGTCCAAGAGAAGGAAAAGGACCATTACTCAAGGGAGACACGGTTATTACCATGGAAAATGGAGTTGGCTTTTTCAAGAATGTTGAGTTTACTGATAACTCTTGCTGGACAAGAAGCGGCAAGTTCCGGCTTGGAATTAAGGTACTGTCATCGAATTCAGACATCAAGGAAGCAAGAAGCGAGCGTATAAGGGTGAAGGATAAGCGAGGAGTGGCAAATGAGAAACCGGATCGTCCTTCGTTGGATGACAAGGTGAGTTGTCTACGTAAGATAGCGAAAAATGGTCCGATCCGCAAGCAGCTGTCCTCGAATGGAATCAAAACTGTCAAGGATCTGTTGCGCTTGCTCACAACTGACCAAGCTTCACTAAAACAGAAAACCGGCCACATTCCGGGGAAGTCGTGGGAGAAGATTATTGAGCATGCCAAGTCTTGTGCCATAGATAATGATGAGCGCTACATCTATCAGTATTTCGCAGGAACAGCAGAGCAACCAATAGCAGCATCCCTTGTCTTAAATTGCATCTATGAGCCTGTGGCGATTTCATTTGATGGCCAAAATTTTTGCAGCCTAGAGTCTTTGAGTTCGGAAGGCAAGCGTTGGGTGGAAACTGCAAAGCGGCAAGCATACAAGAACTTGAAGGATTTGAAGCCATTTGGCGCAAGTTCAGCGGGTCAATCTCTGGAAAACTTTGATTTCCCAGTTTCTCATCAGCAAGGGCAAGGAGTAGGGCAAGCACAAATGGTTCAAGCATCGGCATCGACAGCATCATATATTGGTGAAGGCGCACAGAGTGTTAACGAGCAAGTAGGGTGTTCCAGTCAACATCAGGTGGGATGGGAAGAGTTCGTTGACGATAGCGGATGGAGCAACATCAGCATGAATGCAATACAGGTTGATCCGTATCCAAATTACTCGGACCCAGTTTACCCCTCTTACTATGTTGGAGGTGATTATGGGGCAACATCATCCAACGATTCATTCCCTATCTTTGATGTTCATTATTCAAGCAAAGGTGGGTGCAACACTGTGTGGGCTAAAATCCGAACTGCTGTCATTCGTAATGTTCTTAAATGGGCCATTCTCTATGCCGCCAAAAGGAAGCCCAAGCTTCTTGTTCCCTATCAGTAA	1680	0.4643	MAPNKRGSSSDEGNDDRDLQLPLCKRKAALPDSRISASGSGSTNDMALILEPVIRKVLQEMMPPMLEQVMPRMLEQVIPPILQRYLPSPCDGLSVRGQISPAAGRGRSLQLCLMKGLPATIFTQINITAEDSSPLQVAVCDATIQNSKVTKGDGPSLKVQLCVLKADFESEDWTAEEFNSNIESPREGKGPLLKGDTVITMENGVGFFKNVEFTDNSCWTRSGKFRLGIKVLSSNSDIKEARSERIRVKDKRGVANEKPDRPSLDDKVSCLRKIAKNGPIRKQLSSNGIKTVKDLLRLLTTDQASLKQKTGHIPGKSWEKIIEHAKSCAIDNDERYIYQYFAGTAEQPIAASLVLNCIYEPVAISFDGQNFCSLESLSSEGKRWVETAKRQAYKNLKDLKPFGASSAGQSLENFDFPVSHQQGQGVGQAQMVQASASTASYIGEGAQSVNEQVGCSSQHQVGWEEFVDDSGWSNISMNAIQVDPYPNYSDPVYPSYYVGGDYGATSSNDSFPIFDVHYSSKGGCNTVWAKIRTAVIRNVLKWAILYAAKRKPKLLVPYQ*	560

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo16g0430	559	Pfam	Calmodulin binding protein central domain	263	328	IPR046830	-
	Amo16g0430	559	PANTHER	CALMODULIN-BINDING PROTEIN 60 G	25	549	-	-
	Amo16g0430	559	PANTHER	OS02G0177800 PROTEIN	25	549	IPR012416	GO:0005516
	Amo16g0430	559	Pfam	Calmodulin binding protein C-terminal domain	352	401	IPR046829	-
	Amo16g0430	559	Pfam	Calmodulin binding protein-like N-terminal domain	109	251	IPR046831	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo16g0430	Amo-Chr16	6892639	6895553	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Amo16g0430	48	399	Calmodulin-binding Proteins	AT5G26920	36.872	3.49e-61	206

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo16g0430	-		-	aip:107645943	1051.58