Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0402 ATGGCGAGAGGTCTCATTCCAGTGTTATCAATGATTCTTGTTCAGTTGGCGTATGCAGGGATGAGTATTACCTCAAAGCTTGCCATAGAAGGTGGCATGAACCCTCTTATCCTTGTTGCTTATCGTCAAATCTTTGCCACTATTGCCATTGCTCCCTTCACTTATTGGCTCGAATGGAAAACAGTTCCGAGGATGACAAGGCGCGTTATGCTCCAAATAGTACTTTCTTCCATAACAGGAATAACAGGAAACCAGGTTCTGTTCTTCGTGGGTCTAAAATATTCAACTGCCACAGTTGCGTGTGCACTCACCAATTTGCTCCCAGCTTTTACGTTTGTCCTGGCAGCCATCTTCAGACAAGAGAGTGTGGGAATGAAGAGAAAAGCAGGGGTAGCAAAGGTGTTAGGAACAGTAGTGTGTGTAGGTGGAGCACTGCTTTTATCATTCTACCACGGCAAAACAATTGGTATAGCAGAATCAAGCATTCGTTGGAGCTTTGCGGAGAGAATGGAAGGAAAAAGCAGCTCCAACGGGAACGGAAGCGCGCTTCTGGGTCCTTTTCTTCTTGTGGTTAGTGCCCTTGTTTGGTCACTTTGGTTCATAATTCAAGCAGACATAAGCAAGAATTTCCCAGCTCCATATACGAGCACAAACTACATGTGTTTCTTGGCCAGCATCCAGTGTGTCCTCCTTGCCTTGTCTTTTGACCATACCCCCTCTTCTTGGTCCCTTCATGATCCTATCAGACTTGTCTCTTCTCTTTATGCGGGGGTAGTTTGCACTGGTCTAGCGTACTGTCTCATGTCATGGACCATTGAGAGGAAAGGTCCTTTATACGTTTCAGTATTTAGTCCATTGCAACTTGTTCTCACTGCTGTTGCTAGCTGGGCATTGCTTCGGGAGAAACTATACATTGGAACTGTGATAGGGTCTGTGCTGATAGTTGGAGGGCTATATTGTGTTCTATGGGGAAAGAACAAAGAGATGAACGAGATCATTGCTGAAAAAGAGACAGTCAAGTACAACGAGAGTAATGCAAAGAATAGTGATTTGGAGTTACCATCTTACATACCATCCAACAATGGTAATCATCGTGTAATTGTGGATGTTGCTTAA 1116 0.4435 MARGLIPVLSMILVQLAYAGMSITSKLAIEGGMNPLILVAYRQIFATIAIAPFTYWLEWKTVPRMTRRVMLQIVLSSITGITGNQVLFFVGLKYSTATVACALTNLLPAFTFVLAAIFRQESVGMKRKAGVAKVLGTVVCVGGALLLSFYHGKTIGIAESSIRWSFAERMEGKSSSNGNGSALLGPFLLVVSALVWSLWFIIQADISKNFPAPYTSTNYMCFLASIQCVLLALSFDHTPSSWSLHDPIRLVSSLYAGVVCTGLAYCLMSWTIERKGPLYVSVFSPLQLVLTAVASWALLREKLYIGTVIGSVLIVGGLYCVLWGKNKEMNEIIAEKETVKYNESNAKNSDLELPSYIPSNNGNHRVIVDVA* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0402 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 41 141 - -
Amo16g0402 371 PANTHER WAT1-RELATED PROTEIN 6 341 IPR030184 GO:0016021|GO:0022857
Amo16g0402 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 220 327 - -
Amo16g0402 371 Pfam EamA-like transporter family 184 322 IPR000620 GO:0016020|GO:0016021
Amo16g0402 371 Pfam EamA-like transporter family 6 148 IPR000620 GO:0016020|GO:0016021
Amo16g0402 371 PANTHER WAT1-RELATED PROTEIN 6 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0402 Amo-Chr16 6507738 6512063 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0402 5 365 Nodulin-like Gene Family AT1G09380 57.260 8.39e-150 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0402 - - gmx:100801512 518.079