Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0385 ATGTCTCTCTCTGTCTCGCGCCATCCATCCTCGCCGTTCACAGCCTCGTCGAGTCATCGTGTCACCAGATCTAAAACCTACATGTATAGTCCTGCTTCTGAGGTTGGGACTCCAATTTGTATTCCTTCTAGAGACTTCATTGACATTGGCCGCATTGCCTCCATTGAAAATAACCACACGCCAGTTGATTATGCAAAGAAAGGGCTGAAAGGAGCTATTAAGAATGTTGAAGTATTCATGGACGCATTTAGAGCAGTAATTGAAGAGAGCATTGGTGATCATCCTTTTGATCCTTACATAGCACTTCTGAAAACATTTGGTATCCTAGTAGTAGTTGGGGCTGCAAATGAAATCAAGTTCAGCCCTGCAAGCCTATTCTTCAGATTAAAAACAAATGTCATGTTTTCTTGTCCCAGTATCTTCTTTTCTCAATTTGGCTACGCAGTTAGGTTAGATGAATGTCGCTGTGCACACCAAATTAAGGACCTTGATATATCAAGGAGGAAAGCAGATCTTGAAGGCCACACAACAAGAGCAGATGGTCTGAGGATTATCCCTTTCCTTTTGAAACATTTTCTTCTAACCTTCAGTGAACCAAAAAGTAAACTGGAAATAGTTGTGCATTACCTGTGGAAATACATGACTAAGCCTTCTGTTCACACTCGAAAGTCAAATGGCTGTCCTGAGGATGCAACATTTGAAGTGGCTTTGAAATGCTTCTCAAATAAAACTGGCACTAAAAGCACTATTAAAAAAATTGGTCCAGATGTAATGCAGTTCCTTGTTGGTCACAGAGCCTCTACTTTGCTCTGCTTTAGAATTGTTCCTAGTCCTAGTCCTAGAAATTGA 849 0.4099 MSLSVSRHPSSPFTASSSHRVTRSKTYMYSPASEVGTPICIPSRDFIDIGRIASIENNHTPVDYAKKGLKGAIKNVEVFMDAFRAVIEESIGDHPFDPYIALLKTFGILVVVGAANEIKFSPASLFFRLKTNVMFSCPSIFFSQFGYAVRLDECRCAHQIKDLDISRRKADLEGHTTRADGLRIIPFLLKHFLLTFSEPKSKLEIVVHYLWKYMTKPSVHTRKSNGCPEDATFEVALKCFSNKTGTKSTIKKIGPDVMQFLVGHRASTLLCFRIVPSPSPRN* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0385 282 PANTHER NEGATIVE REGULATOR OF SYSTEMIC ACQUIRED RESISTANCE SNI1 162 268 IPR034561 GO:0005634|GO:0006974|GO:0030915|GO:0031348|GO:0045892
Amo16g0385 282 Gene3D Translation factors 29 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0385 Amo-Chr16 6201004 6204137 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0385 34 76 Eukaryotic Initiation Factors Gene Family AT1G76810 79.070 2.94e-16 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0385 - - ahf:112756512 179.104