Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0384 ATGACTGTAGTTGAGGCATATYTTGGAAGGAACAAATTACATCCACCAGATGACTCATCAAAGTTAAATCCGGAAGTTTTATCCTTGATAAACGAGGGCATTGCCCAGAATACTACTGGAAATGTTTTTGTGCCTAAGGAAGGGGGAGAGGCAGAGATTTCAGGATCTCCTACAGAGAAGGCAATTCTTTCATGGGCAGTAAAATTGGGTATGAATTTCAGTCTTCTCAGATCAAATACGATAGTTCTCCATGTCTTCCCCTTTAATTCCGAGAAAAAAAGAGGAGGGCTCTGGAGTACATACACATTGGAAAGGAGGGCTCTTGATCACGAGGGATTTGTTGCTGAGGGGCCTAATATGAATGTGGCTTTTGTGACTAAAGAGAAGGAGCTTATAATGCCCCACTTCGATAAAATTCTTAGTGGCTGCACAGCTAAGAGGGTTTTGACGCTTGCTGAGAAGTTGTTGAGCAAGGGTAAGCTTCGTGGGATAAGGATGAAACATGTGACTGTTGAGGAAGGAAAGAGTGCCGCTGAAATGATGCTTATTGGCAGTGGCGTCCTTGTTTGCCCTGTAGTGCAGTGGGACGAGCAAGTTATTAGAGATGGCAGATATTGGTCTTTCTATGGGCATCCAAGGAACTGA 645 0.4372 MTVVEAYXGRNKLHPPDDSSKLNPEVLSLINEGIAQNTTGNVFVPKEGGEAEISGSPTEKAILSWAVKLGMNFSLLRSNTIVLHVFPFNSEKKRGGLWSTYTLERRALDHEGFVAEGPNMNVAFVTKEKELIMPHFDKILSGCTAKRVLTLAEKLLSKGKLRGIRMKHVTVEEGKSAAEMMLIGSGVLVCPVVQWDEQVIRDGRYWSFYGHPRN* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0384 214 Gene3D - 1 102 IPR023299 GO:0000166
Amo16g0384 214 PANTHER BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE-LIKE 108 204 - -
Amo16g0384 214 Gene3D - 104 209 IPR043132 -
Amo16g0384 214 SUPERFAMILY D-aminoacid aminotransferase-like PLP-dependent enzymes 108 205 IPR036038 GO:0003824
Amo16g0384 214 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 1 157 IPR023299 GO:0000166
Amo16g0384 214 Pfam Amino-transferase class IV 108 194 IPR001544 GO:0003824
Amo16g0384 214 PANTHER AMINO-ACID AMINOTRANSFERASE 108 204 - -
Amo16g0384 214 Pfam Cation transport ATPase (P-type) 46 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0384 Amo-Chr16 6178250 6183298 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0384 1 97 Primary Pumps ATPases AT3G21180 64.948 2.68e-38 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0384 K18482 K01537 ahf:112756342 401.749