Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0382 TCGCCAGTAGATTATTGCGATGCTGGTGCAGCAGTATCTGAAGATTATATTTCTGGTCTACAACGTGCTTCTAAAGGGATTTATAATAATGATGGTTCTCTAAGATATAGTACTACCAAACACTACAATGGCAGTGAAGGTGACTGTTTTTATGTTGTTGGTAGTGGAGAATTTGAAGTCTTGGCAACTCAGGAAGAAAAAGATGGGGAAGTAACCAAGGTTTTACAGCATTACACATCGGAAAAACTATCATGCTTTGGAGAGCTTGCTCTAATGTACAATAAACCACTCCAGGCTTCTAGCTTACACGAAGAAGATGAGAAATTAATTGATAAATTATCAGAGAAAAAGTCTTTGCTGAGGAACCTCCATGATGTTGGCAAAGAAATGCAAGTAAACAACGAGAGTGGTGCCGTGAGCTGA 423 0.3901 SPVDYCDAGAAVSEDYISGLQRASKGIYNNDGSLRYSTTKHYNGSEGDCFYVVGSGEFEVLATQEEKDGEVTKVLQHYTSEKLSCFGELALMYNKPLQASSLHEEDEKLIDKLSEKKSLLRNLHDVGKEMQVNNESGAVS* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0382 140 Pfam Cyclic nucleotide-binding domain 44 100 IPR000595 -
Amo16g0382 140 Gene3D Jelly Rolls 41 125 IPR014710 -
Amo16g0382 140 SUPERFAMILY cAMP-binding domain-like 44 100 IPR018490 -
Amo16g0382 140 ProSiteProfiles cAMP/cGMP binding motif profile. 44 100 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0382 Amo-Chr16 6157580 6159169 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0382 44 100 PP2C-type Phosphatase Gene Family AT2G20050 77.193 5.81e-23 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0382 - - aip:107644412 115.931