Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0381 ATGTCAGCTGTCAAGCTTGCCCAACTAGCCTTAATTGATCCCAAGCGTGCAAAGAGGATTTGGGCAATAGGCAGTGCAAGATCAAAAGAGAGGAAGATGCGCTACATTGTTGAATGTGAAAGGAAGGTGCAGACATTGCAAACTGAAGCAACATCTTTGTCTGCACAGTTAACTCTATTGCAGGTACAAAATGGCATATTATTCAAACTATAG 213 0.4178 MSAVKLAQLALIDPKRAKRIWAIGSARSKERKMRYIVECERKVQTLQTEATSLSAQLTLLQVQNGILFKL* 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0381 70 CDD bZIP_plant_RF2 16 64 IPR044759 GO:0003700|GO:0006355
Amo16g0381 70 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 1 65 - -
Amo16g0381 70 Coils Coil 36 56 - -
Amo16g0381 70 Gene3D - 23 68 - -
Amo16g0381 70 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 1 65 - -
Amo16g0381 70 SUPERFAMILY Leucine zipper domain 24 67 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0381 Amo-Chr16 6154913 6155703 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0381 1 66 bZIP Transcription Factor Family AT2G31370 78.261 1.70e-27 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0381 - - egr:104435578 99.3673