Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0369 ATGAAGTCTGTTCTGATTTGCAGATGTGTTTGCAAGCATTGGAACACATTTATTTCTGATCCAAACTTTGCCAAGTTACTCTTTACTTATACACTTCCTGCTCCCATGATCCGACCCTTCCTTTCAAGAATCTTTCACCTGGTTGAATATGACCGAATTGAATGGCATGAAAAGAGAAATAATCCATTTGTGTTTGAGGTTCTGAATCTCAATAATAGCAACAGCATAAAACTTGATCCTAAATTTGAGATTCCTCTCCCTCATCCTAAATCAATCCTGAGTAATGTGCTTTCTTGTAATGGTCTTTTTTACTTGAGTGATTCCGTGTATATAAACATTTCACTTGTTTGCAACCCAATAAGCGGTGAGTTCATAAGACTTCCAGAAAACCCTCCAATCCTGAGACTCTGCAAGCAAATAAGTTGGGGTTTTGGTTTCCACCCAAAAACAAACCAATACAAAGTAATGAGAATATATATCTTTAAACATGATCATAGTATAGGTGTTGAAATGCACACACTTGGAGCATCGACATGGATAAATATTGAGGTAGATTATCCCAAGAATTTGATAAATTTGTATAATTATTGTACTTATTTAAATGGGGCACTTCATTGGACTGGTAAGGATGTTGATGGAAATGTCTCAATATGGGCTTTCAATTTTGACACGGAGAAGTTCCAATCCTTCTCTATGGCGCCCATAGATCAAGGTACAAGACTCACCTTATTCGAATTCAGGGGTTCGCTTTGCTTGATATATTTTAATGAGCTACTTGTCACATTGTGGAGGATGGAAAGATATGGAGTTCGAGAATCATGGACTCCCATTTTTCAGTATTCTGCAAGTTTCAACGAAAATACTAATTCTTTCATAACTACATCTCAATTACATGGTTGCATTGCCTACTATGATCCTGAAAATCAAGAGTTTAGGATTTTGTTGACTCCTTGGTATGATGGCAATTTTCAAATAGTTCACCATGTTCCTTCTCTCATTCCATTGAAGGATATTATCATGGGAGATAATGTTTGGGTGAGAAATAGAATAATCAGGAAGAAAATTCATGTGCATGTAGAGCACGTTATGCCTTCGAGGTGCACTGAGTTCTGCCTCAGGAAGATCAACAATGACAAATTTAAGGCTGAGGCAAAGGCTAATGGACAAAAGATCATTACCAAGAGACAGCCTGAGGGCCTAAACCTGGATTCATGGTTGAAGGTGCCACATTAG 1233 0.3755 MKSVLICRCVCKHWNTFISDPNFAKLLFTYTLPAPMIRPFLSRIFHLVEYDRIEWHEKRNNPFVFEVLNLNNSNSIKLDPKFEIPLPHPKSILSNVLSCNGLFYLSDSVYINISLVCNPISGEFIRLPENPPILRLCKQISWGFGFHPKTNQYKVMRIYIFKHDHSIGVEMHTLGASTWINIEVDYPKNLINLYNYCTYLNGALHWTGKDVDGNVSIWAFNFDTEKFQSFSMAPIDQGTRLTLFEFRGSLCLIYFNELLVTLWRMERYGVRESWTPIFQYSASFNENTNSFITTSQLHGCIAYYDPENQEFRILLTPWYDGNFQIVHHVPSLIPLKDIIMGDNVWVRNRIIRKKIHVHVEHVMPSRCTEFCLRKINNDKFKAEAKANGQKIITKRQPEGLNLDSWLKVPH* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0369 410 PANTHER F-BOX PROTEIN 2 287 - -
Amo16g0369 410 Gene3D - 365 406 - -
Amo16g0369 410 SUPERFAMILY F-box domain 2 51 IPR036047 GO:0005515
Amo16g0369 410 PANTHER OS09G0372900 PROTEIN-RELATED 2 287 - -
Amo16g0369 410 TIGRFAM F_box_assoc_1: F-box protein interaction domain 98 295 IPR017451 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0369 Amo-Chr16 5893396 5896620 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0369 343 410 Cytoplasmic Ribosomal Protein Gene Family AT1G09690 52.564 1.24e-16 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0369 - - adu:110272941 606.675