Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0366 ATGGAGATTTATTCTATGGTCTATTCTGATTTTGGCCTAGCACGTGAGATCAGTTCACAACCACCCTACACTGAGTATGTCTCCACACGGTGGTATCGTGCTTCTGAAGTGCTACTTCAATCTTATCTGTATAGCTCCAAAGTTGACATGTGGGCAATGGGTGCTATAATGGCTGAACTGTTCTCTCTTCGTCCTCTTTTCCCTGGTGCCAGGTCATTAAAGGCACCTGATGTATCAAAGCTAGTTTTCGGAAGCAAATTGCCTATTCTAAGTGATGAAAAACTATCATTGAAGCTTTTCGAGGCAAAAAAACGAGAGCGGGCCTTTACGAATAGAGGACGCCGGAATCAGTTGCGCTCAATGGGAGAAGCCAAGAATTTGCTTCAATATATGTTCAATTCAGTCGCAGATGTTAGGTGCTCTATTTGA 429 0.4312 MEIYSMVYSDFGLAREISSQPPYTEYVSTRWYRASEVLLQSYLYSSKVDMWAMGAIMAELFSLRPLFPGARSLKAPDVSKLVFGSKLPILSDEKLSLKLFEAKKRERAFTNRGRRNQLRSMGEAKNLLQYMFNSVADVRCSI* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0366 142 ProSiteProfiles Protein kinase domain profile. 1 142 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo16g0366 142 Pfam Protein kinase domain 9 141 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo16g0366 142 SUPERFAMILY Protein kinase-like (PK-like) 9 81 IPR011009 -
Amo16g0366 142 Gene3D Transferase(Phosphotransferase) domain 1 9 132 - -
Amo16g0366 142 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 9 71 - -
Amo16g0366 142 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0366 Amo-Chr16 5760600 5762447 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0366 9 69 MAP Kinase Gene Family AT4G11330 55.738 4.12e-18 77.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Amo16g0366 Pkinase 1.9e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0366 K08829 - aip:107619606 261.536