Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0352 ATGGAAATGGAGTTAATAAGTTGGGCATGGATGAGTGGTGCCACATTGTTGGCATGGTACTTTGTGTTAAACACATTGGGGAGAAGGATCAATGAATGGTATTATGGTTTCAAGTTAGGAGACAAGCATCGCCTTCTTCCTCCTGGTGACATGGGTTGGCCTCTTATCGGCAAAACATTGCACTATTTCAAGCACCCTCATTTATTTGTCCACAATCTTGTTTCCAAATACAGAGGAAATGGAATGTACAAGACACATTTGTTCATGAAGCCAACAATCCTGGTGTCCAGTGTAGAGGCCTCAAGGAGAGTGTTAACTGATGATAAAAACTTTAGGCTTGGTTATCCTGAAACCGCCATAACAGTGATTAAAACGATCTTATCTGAAGTGTCAAGCGAGGATCACAAGCGTTTTCGACGCCTAGTCACTTCCCCCATTCTGGGTTACAATGCTTTGGCCATGTTTCTTGAACGCATAGAGGACATTGTTGTCAATTCACTCCAACGAATGGCCAATGATAGCATACAACATCCTATTGAGGTCATCACAGAGACCAAGTCTCTCGCCATGAGAGTCATCCTTCACATCTTCATGGGTTCTAAGGATCAAAACATAATCAAGCAAGTTGAGCATTTGTTTAGTGATATTGATGATGCCTTGTTCTCTTGGCCAATTAACTTACCTGGTTTTTCGTATTACAAAGCTCTCAAGAACCGCAAGAAGGTGGAAAAAATAGTTGAATCCGTTGTGCAAGATAGAAAGATGATGTTAAAAAATGGTGAAGTATTATCAGAGAAGAAAGATCTTGTGGATGTTCTTTTGGAACTGGAAGATGTGAATGGTCGAAAATTAAAGGATGAAGACATTGTTGACTTGTTGATATTATTCTTAGTAGCGGGTCAGCAGACTACAGCTAGCACTATAATGTGGGCAATGATTTATCTTACTAACAATCCACTTGTTTTCAAGAAAGCTAAGGAGGAGCAAGAAGAAATCATGAAGTCAAGGTCACCTTCGCAACAGTATCTAAATATTGAGGAAATTAAGAAAATGGTTTATCTAAGTAAGGTAATTAACGAAATATTGCGTGTGACCGATTTTTCGTTTCTACTTTTTCGAGAGGCAACTACCGATGTGAACATCAATGGTTATATCATACCCAAAGGATGGAAAGCAGTAGTTTCGCCGAAAACTTGTCATATGTCTTCTGAATATTTTACAAATCCGGAAAATTTTGATCCTTCCAGATGGGATGATAATAATAATAATAATAATGCAAATCGAGAAGCCCTCATTCTCTTTGGAGTTGGAACAAGGATGTGCGCTGGAAGAGATCTCACCAAAATTGAATTGTTCATCTTTCTACATCATTTCGTTCGTAATTACAAGTTTGAGCAAATAAATCCAGAATGCCCTGTCTCTTGCTTCCCACTACCCGTGCCTACAGATAATTGTCTTGCTAAGGTCGCAAAGGTCTCAATGGAATAG 1488 0.3918 MEMELISWAWMSGATLLAWYFVLNTLGRRINEWYYGFKLGDKHRLLPPGDMGWPLIGKTLHYFKHPHLFVHNLVSKYRGNGMYKTHLFMKPTILVSSVEASRRVLTDDKNFRLGYPETAITVIKTILSEVSSEDHKRFRRLVTSPILGYNALAMFLERIEDIVVNSLQRMANDSIQHPIEVITETKSLAMRVILHIFMGSKDQNIIKQVEHLFSDIDDALFSWPINLPGFSYYKALKNRKKVEKIVESVVQDRKMMLKNGEVLSEKKDLVDVLLELEDVNGRKLKDEDIVDLLILFLVAGQQTTASTIMWAMIYLTNNPLVFKKAKEEQEEIMKSRSPSQQYLNIEEIKKMVYLSKVINEILRVTDFSFLLFREATTDVNINGYIIPKGWKAVVSPKTCHMSSEYFTNPENFDPSRWDDNNNNNNANREALILFGVGTRMCAGRDLTKIELFIFLHHFVRNYKFEQINPECPVSCFPLPVPTDNCLAKVAKVSME* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0352 495 Pfam Cytochrome P450 47 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g0352 495 PANTHER CYTOCHROME P450 88D6 28 470 - -
Amo16g0352 495 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g0352 495 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g0352 495 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g0352 495 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g0352 495 PANTHER CYTOCHROME P450 26 28 470 - -
Amo16g0352 495 SUPERFAMILY Cytochrome P450 45 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g0352 495 Gene3D Cytochrome P450 40 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g0352 495 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g0352 495 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g0352 495 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g0352 495 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g0352 495 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g0352 495 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g0352 495 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0352 Amo-Chr16 5447591 5452731 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0352 4 490 Cytochrome P450 AT1G05160 39.554 5.95e-137 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0352 K04123 K17875 aip:107647938 643.269