Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0250 ATGGATGGATATAATGTTTGTATTTTCGCATATGGTCAAACTGGATCTGGGAAGACATACACCATGAGTGGTCCATCAGGTGGAACCTCTAAGGATATGGGGATCAATTATCTTGCTCTTAAGGATTTGTTTCGAATGTCTAATGACAGGAAAGACATTGTGACATATGACATTTATGTTCAAATGGTCCAGATTTACAATGAACAAGAACCAACAACAGAATTGGTTGAAGTAAAGTCTCCAATCAAGGGTGCTAGCCATGCAAATGATGTAAGATCATCGGTTACAGCTGTAGAAAGGACACAGAGGAGGCAATCACTAACTGGAATTCATGGATCCGGGCCGAATTGCAGATCTTCGCTTGGAGGGAAGCCGTACCATATGAGGAGAGAAATGCTAGAACACCTCCTCCGGCAGCGGCAAAGACCTCAAAACGGTAGGAACTAG 447 0.4295 MDGYNVCIFAYGQTGSGKTYTMSGPSGGTSKDMGINYLALKDLFRMSNDRKDIVTYDIYVQMVQIYNEQEPTTELVEVKSPIKGASHANDVRSSVTAVERTQRRQSLTGIHGSGPNCRSSLGGKPYHMRREMLEHLLRQRQRPQNGRN* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0250 148 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 72 IPR027417 -
Amo16g0250 148 PANTHER KINESIN-LIKE PROTEIN KLP-3 1 86 - -
Amo16g0250 148 Pfam Kinesin motor domain 1 80 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo16g0250 148 ProSiteProfiles Kinesin motor domain profile. 1 148 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo16g0250 148 Gene3D Kinesin motor domain 1 109 IPR036961 -
Amo16g0250 148 SMART kinesin_4 1 147 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo16g0250 148 PANTHER KINESIN-LIKE PROTEIN KIN-14L 1 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0250 Amo-Chr16 3763717 3764532 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0250 1 121 Calmodulin-binding Proteins AT5G65930 30.216 1.51e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0250 K10406 - aip:107646292 145.591