Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0243 ATGTTGGATTGGATGTACAAACAGGGTTTTCGTAAAGTTGCAACAAGCAGATGGGAATTCTCCAATGAGAAGTTCAAGAAAGGRGAAAGAGAAATGCTATGTGAAATTCGAAGAAGAAGAGCATGGACAAGCAAGCAACGGAATGCAGCAWKAAARCAAGGTGCACCCCAAGACTCCGATGAAGATCAAAGGTCTTCATCGACTTCTTCGTCTTCGGGTTACACCACTCTAGTTGATGAGAACAAGCGCCTCAAGAAGGAGAATGGGAGGCAGGTGAAGAGGAAGAGAGACGAGATACGTGAAAGCGCAAGCATTTTGCTCTCTCAATCATGCAAATAG 339 0.4395 MLDWMYKQGFRKVATSRWEFSNEKFKKGEREMLCEIRRRRAWTSKQRNAAXKQGAPQDSDEDQRSSSTSSSSGYTTLVDENKRLKKENGRQVKRKRDEIRESASILLSQSCK* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0243 112 MobiDBLite consensus disorder prediction 79 102 - -
Amo16g0243 112 MobiDBLite consensus disorder prediction 60 78 - -
Amo16g0243 112 MobiDBLite consensus disorder prediction 44 112 - -
Amo16g0243 112 PANTHER HEAT STRESS TRANSCRIPTION FACTOR B-3 9 89 - -
Amo16g0243 112 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 9 89 IPR027725 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0243 Amo-Chr16 3661678 3662181 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0243 9 88 HSF AT2G41690 47.423 1.17e-19 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0243 K09419 - qsu:112013936 124.405