Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0237 ATGGCTTCGTCTTCCTCTGATCCCGGCAAGTCAGATGCCGGAGGCGGCGCTGCGGACACGTCGGAGGCGGTGGTGGCAGCTGCCAACGATCAGCTTCTGCTGTACAGGGGACTCAAGAAGGCGAAGAAGGAGAGAGGCTGCACCGCCAAAGAGCGTATCAGCAAGATGCCACCGTGCGCCGCCGGCAAACGCAGTTCCATATACCGCGGCGTTACCAGACATAGATGGACTGGTCGTTATGAAGCACATCTTTGGGATAAGAGTACGTGGAACCAGAATCAGAATAAGAAAGGGAAGCAAGGTTCTGCTCTGAGATATACCTTCCTCTGTTTTTCTGTTTTCTGTCTCTTTCTAATTTTGTTTGTAAATATATGA 375 0.5147 MASSSSDPGKSDAGGGAADTSEAVVAAANDQLLLYRGLKKAKKERGCTAKERISKMPPCAAGKRSSIYRGVTRHRWTGRYEAHLWDKSTWNQNQNKKGKQGSALRYTFLCFSVFCLFLILFVNI* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0237 124 Gene3D AP2/ERF domain 67 107 IPR036955 GO:0003700|GO:0006355
Amo16g0237 124 PANTHER OS03G0770700 PROTEIN 1 102 - -
Amo16g0237 124 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0237 Amo-Chr16 3562103 3562877 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0237 25 100 AP2-EREBP Transcription Factor Family AT2G41710 92.105 2.85e-47 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Amo16g0237 AP2 0.0002 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0237 K09285 - gmx:100786651 182.185