Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0221 ATGATTGTAAAGCTCTTGATGGAACCCAGTCTTGACAAAAATTTTGGCTCTAAAGATATCTCTGTGATTCCCATTGTGGGAATTGGAGGTTTGGGAAAGACCACTCTTGCTAAGCTTGTCTTCAATGATAAAAGGATAAATGAGTCCTTTCCATTGAAAATGTGGGTCTGTGTGTCTGATGAATTTGATATCAAGCAATTGATTATTAAAATCATCAATGCTGCTACTCTTAATGGTACCACTTCTGGAGATGCTCATGTGGTCCAACAAACCTTGAAAGACTTGGACATTGAACAATTGCAATATCTTCTAAGAAATAAGCTTGCTGGTCAGAAGTTCTTACTGGTCTTGGATGATGTATGGAGTGAAGATCGTGCCAAATGGATTGAACTGAGAGATCTCATCAAAGCCGGTGGTGCTGAAGGAAGTAAAATTGTAGTGACAACACGAAGTTACTCTGTTGCTTCTATAATGGGTACTGTGCCTTTTCATGATTTACAAGGTCTTTCGTTTGAAGAATCTTTGTCTTTGTTTGTTAAATGGGCTTTTAAAGGAGGAGAAGAGGAAAAGTACCCTAATTTGGTAATGATTGGAAAAGAAATTGTGAGAAAGTGTAAAGGAGTTCCTTTAGCAATAAGAACGTTGGCAAGTTTACTATTTTCAAAATATGAGATAAATGTCTGGGAATCAATGAGAGATAATGAGATTTGGAATTTACCACAAAAGAAGGATGATATCTTACCTGCACTAAAATTAAGCTATGATCAAATGCCATCCTATTTGAGGAAATGTTTTGCTATGTTCTCACTTTTTCCAAAAGATTTTGAATTTCAGAGTCATGACGTTCATTCACTTTGGCGTGCAGCAGGTTTGCTTCCATCACCAAGCAAAAATGAAACTTCACTAGATATTGCAAATCGATATCTGAGTGAATTAATGTCAAGGTCTTTTCTTGAAAATGTTTCTGACGTAAGCACATACTATTACTTTTTTATACATGATTTGGTGCATGATCTTGCACAATATGTTGCTAACGATGACTACCAACTAATCAGTTCTGAAAATCCAAATATACCAGAAAATGTTCTCCATCTGTCTTTTACTGAACTTGGTTTGTTTAGCAAATCTTTCAAGCTAAACTTGTCAAGTGTGAGAACTATACTATTTCCTTTTGGAATAGAGAAAGCTGGCAATGAAGATCTGTTAACGACATGGGTGTCAACTTGCATATACTTGCGATACTTGGATCTGCGTGATTCCACATTTGAGACTCTACCTAGATCAATTAGCAAATTGAAACATTTGAGATTTCTTTCGCTCAGGAATAACAGAAGAATAAGGAAACTCCCTGCTTCTATTTGCACGCTCCAAAATTTGGAAGAGTTGCATCTTCGTGGGTGTGTGGAGCTTGAAACTTTGCCAAAAAAGTTAAGAAACTTGATCAATCTGCAAAGAATATCCATAACCTCAAAGCAATCTGTCTTGCCAGAGGGTGATATTGCAAAGTTGGGTTCGCTTAAATATTTAGATATTTATGCTTGTGACAACCTGGAATCTGCATTTGTAGGGGTAAAGTTGTCTGCCCTTCGATTTTTGCGGATTATGAGGTGTAAGAATTTGAAGTCTTTGCCACTTGACACAAACCATTTTCCTCAACTAGAGCAATTCACTGTCGATGAATGTGGTAATTTTGAACTGTCAGATGGACATGAGGACATGAACTCTGTCTTGAGGTTAACGACAATTTACTTTAGCATGGTGGTGAACTTCCCTCATTCTCTCCAGGGATATGCAAACACATTACAAACTTTGGTCTTCGCAAAGTGCTACGAGCTGGAGGCGCTTCCTGAATGGCTGCTAAATATGACTTCTTTGAAATATCTTCATATTTGGAGTTGCCCAAAGTTGGTATCTCTCCCCAGTGGCATCCACCGTCTTACAGCCCTTGATGTTTTGCGAATCGAAGATTGCCCTGAATTGTACACAAACTATCAGCCACATGCTGGAGAGTATTGGCACCAAATATCCCACATCAAGCATGTTGACATTAGGAAGACATGGAGAAGTCGCTAA 2073 0.3801 MIVKLLMEPSLDKNFGSKDISVIPIVGIGGLGKTTLAKLVFNDKRINESFPLKMWVCVSDEFDIKQLIIKIINAATLNGTTSGDAHVVQQTLKDLDIEQLQYLLRNKLAGQKFLLVLDDVWSEDRAKWIELRDLIKAGGAEGSKIVVTTRSYSVASIMGTVPFHDLQGLSFEESLSLFVKWAFKGGEEEKYPNLVMIGKEIVRKCKGVPLAIRTLASLLFSKYEINVWESMRDNEIWNLPQKKDDILPALKLSYDQMPSYLRKCFAMFSLFPKDFEFQSHDVHSLWRAAGLLPSPSKNETSLDIANRYLSELMSRSFLENVSDVSTYYYFFIHDLVHDLAQYVANDDYQLISSENPNIPENVLHLSFTELGLFSKSFKLNLSSVRTILFPFGIEKAGNEDLLTTWVSTCIYLRYLDLRDSTFETLPRSISKLKHLRFLSLRNNRRIRKLPASICTLQNLEELHLRGCVELETLPKKLRNLINLQRISITSKQSVLPEGDIAKLGSLKYLDIYACDNLESAFVGVKLSALRFLRIMRCKNLKSLPLDTNHFPQLEQFTVDECGNFELSDGHEDMNSVLRLTTIYFSMVVNFPHSLQGYANTLQTLVFAKCYELEALPEWLLNMTSLKYLHIWSCPKLVSLPSGIHRLTALDVLRIEDCPELYTNYQPHAGEYWHQISHIKHVDIRKTWRSR* 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0221 690 SUPERFAMILY L domain-like 332 678 - -
Amo16g0221 690 Pfam NB-ARC domain 17 255 IPR002182 GO:0043531
Amo16g0221 690 Gene3D - 253 340 IPR036388 -
Amo16g0221 690 PRINTS Disease resistance protein signature 22 37 - -
Amo16g0221 690 PRINTS Disease resistance protein signature 501 517 - -
Amo16g0221 690 PRINTS Disease resistance protein signature 107 121 - -
Amo16g0221 690 PRINTS Disease resistance protein signature 205 219 - -
Amo16g0221 690 Gene3D Ribonuclease Inhibitor 570 668 IPR032675 -
Amo16g0221 690 Gene3D Ribonuclease Inhibitor 341 569 IPR032675 -
Amo16g0221 690 PANTHER DISEASE RESISTANCE PROTEIN RP 2 668 IPR044974 GO:0006952
Amo16g0221 690 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 267 IPR027417 -
Amo16g0221 690 Gene3D - 2 161 IPR027417 -
Amo16g0221 690 PANTHER OS05G0492600 PROTEIN 2 668 - -
Amo16g0221 690 Gene3D - 168 252 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0221 Amo-Chr16 3338232 3340304 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0221 19 662 WRKY Transcription Factor Family AT5G45050 22.727 6.34e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0221 - - gmx:100777049 766.918