Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0217 ATGGCTGAATCATTCATCTTCAGCATCGCTGAATCACTCATAACTAAGCTTGCTTCTCGTGCATACCAAGAAGCATCTCAGGTGGTTGGTGTCTACGATGACCTCCAAGACTTGAAAACCAGTCTCTCATATGTGAAAGCTGTGCTGTTGGATGCTGAGCAGAAGCAGGAGCAGAACCACGAACTGCGAGAGTGGCTGAAGCAGATCAAACTCATCTTCTATGATGCTGAGAACGTGCTTGATCAAGTTAACTGTGAAACACTGCGCAAGCAAGTCATCAGAGACTACGGCACTCCCAAGGACAAGGTAGGCCGCTTCTTCTCGAGTTCTAATCCACTTGTGTTTCGTTATAAGCTTGCTCTTCAGATCAAAGATATTAGGAAGAGATTAGACAGAGTCGCGGCTGATAGGGATAAGTTTGGGCTTCAAGTAATTGATGTTGATAGGCGAGTTGTGCATAGCAGGGAAATGACTTACTCCCATGTTGTTGAGTCTGATGTCATAGGACGTGCTCATGATAAAGAAATGATTGTAAAGCTCTTGATGGAACCGAGTCTTGACAACAATGGTGACTCCAAACATATCTCCGTCATTCCCATTGTGGGAATTGGAGGTTTGGGAAAAACCACTCTTGCTAAGCTTGTCTTCAACGACGAAAGGATAAGAGAGTCTTTTCCGTTGAAAATGTGGGTGTGTGTGTCTGATGACTTTAATATCAAGCAATTGATTATTAAGATCATCAATGCTGCTAGCAATTTTGTTTCTACTGGTGCTCTTCCGGGCCACCAAAATTTAAAAGAATTAGAGGTTGAACAATTGCAATATTGTCTAAGAAACATGCTTGAGGGTCAAAAGTTTTTCCTAGTGTTGGATGATGTATGGAATGAAGATCGTGTTAAATGGGTTGCGCTGCAAGATCTCATTTCAGTGGGTGCTCAAGGAAGCAAAGTAATAGTCACAACACGTAGCCCATCCATCGCTTCGATGATGGGTACCGTTGCCTACTCGCACCATTTAAAAAGTCTTTCTCCCGAGGATTCATTGCGTTTGTTCGTTAGATGGGCTTTTAAAGAAGGAGAAGAGGGAAAATATCCAGATTTGATAATGATTGCAAGAGAAATCGTAGACAGGTGCAAAGGAGTTCCTTTAGCGGTCAGAACGTTGGGAAGTTCACTATTTTCCAAACACGAGAGACAAGAGTGGGAATCATTGAGAGACAAGGAGATTTGGAATTTGCCACAAAAAAAGGATGATATCTTACCTGCATTAAAATTAAGCTATGATGAAATGCCATCCCATTTGAGGCAATGTTTTGCCTTGCTCTCCCTTTATCCAAAGAATCATTATTATATTTCTTTTGGCGTTGCTTCACTTTGGGGGGCAGCAGGTTTGCTTTCATTGGAAAGCAAAGATAAAACAATAGTAGACGTTGCACATCAATATTTGAGAGACTTAATGGCAAGATCTTTTCTTCATGACGTTTTTTATTGTGGAACCTTTTATATATTTGACATACATGATTTAGTGCATGATCTTGCAGTATATGTTGCAAAAGATGTGTGCCAATTGGTCAATTCAAACACGCAGGATATATCAGAAAATGTGCTGCATTTGTCTTTTGTTGAGAATGGTTTGCCTTTCAATTCCATCAAGACAAGCTTACAAGGTGTGAGAAGCATTCTGTTTCCAGTTGACAATCAGGGAGCCAGTGAAGCTTTCTTGGATGCATGGGTGTTAAACTGCAAATACCTGCGATATTTGGATTTAAGTGATTCTACATGTGAGACTCTGCCTGAGTCAATTGGTAAGTTGAAACATTTAAGATATATTTCTCTTCAGGGTAATACAAGAATAAAGAGGCTCCCTAATTCTATTTGCAAGCTGCAACATTTGCAAGTTTTGCTTCTTGATAGGTGTTCAAATCTGGAAACTTTACCGAAAAAGATAAGAAAGTTGATCAGTCTGCAAAGATTGGATATAACCACAAAGCAATCTATTTTGCCAGAGAGTGACATTGCAAAGTTGAATTGTCTTGAACATTTGTCTGTCGAAAATTGTGATAATTTGAAGTCCTTGTTTGTTGAGACAAGATTGCCTACACTTCGAACTTTGCAAGTTCGTGGCTGTGCGAATCTAAAGTCTTTGCCACTTGATACTCAGCATTTTCCTCAGTTAGAAACTTTGGGAATCAGCAGTGTTGGCAATGAAGATTGGCTTCATAGATCAGAGGATACTAATGCTGTCTTGAGGTTAAAAACCATTGTTCTTTTTGAAATGGRAACATTGCCTCATTCTCTCCAACAATATGCAAGCACGTTACAAGGTTTGATGATTTCACGTTGCTACGAGCTGGAGGTACTGCCCGAATGGCTGTGGAATCTGAGTTCTTTGAAATTTCTTTATATCTCCCGGTGTCCGAAATTGAAGTCTCTTTCCAGTGATATCCACCGTCTAACAAGTCTGCAAGTTTTGCGAATCATAAATTGCCATGAGTTATATAGAAAATACGAGCCACAAGTTGGAGAGTGCTGGCCCATGATATCTCACATCAAGCATACTGACATTAGGAACACATGGGAATAG 2583 0.4026 MAESFIFSIAESLITKLASRAYQEASQVVGVYDDLQDLKTSLSYVKAVLLDAEQKQEQNHELREWLKQIKLIFYDAENVLDQVNCETLRKQVIRDYGTPKDKVGRFFSSSNPLVFRYKLALQIKDIRKRLDRVAADRDKFGLQVIDVDRRVVHSREMTYSHVVESDVIGRAHDKEMIVKLLMEPSLDNNGDSKHISVIPIVGIGGLGKTTLAKLVFNDERIRESFPLKMWVCVSDDFNIKQLIIKIINAASNFVSTGALPGHQNLKELEVEQLQYCLRNMLEGQKFFLVLDDVWNEDRVKWVALQDLISVGAQGSKVIVTTRSPSIASMMGTVAYSHHLKSLSPEDSLRLFVRWAFKEGEEGKYPDLIMIAREIVDRCKGVPLAVRTLGSSLFSKHERQEWESLRDKEIWNLPQKKDDILPALKLSYDEMPSHLRQCFALLSLYPKNHYYISFGVASLWGAAGLLSLESKDKTIVDVAHQYLRDLMARSFLHDVFYCGTFYIFDIHDLVHDLAVYVAKDVCQLVNSNTQDISENVLHLSFVENGLPFNSIKTSLQGVRSILFPVDNQGASEAFLDAWVLNCKYLRYLDLSDSTCETLPESIGKLKHLRYISLQGNTRIKRLPNSICKLQHLQVLLLDRCSNLETLPKKIRKLISLQRLDITTKQSILPESDIAKLNCLEHLSVENCDNLKSLFVETRLPTLRTLQVRGCANLKSLPLDTQHFPQLETLGISSVGNEDWLHRSEDTNAVLRLKTIVLFEMXTLPHSLQQYASTLQGLMISRCYELEVLPEWLWNLSSLKFLYISRCPKLKSLSSDIHRLTSLQVLRIINCHELYRKYEPQVGECWPMISHIKHTDIRNTWE* 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0217 860 Pfam NB-ARC domain 186 428 IPR002182 GO:0043531
Amo16g0217 860 PANTHER OS05G0492600 PROTEIN 22 839 - -
Amo16g0217 860 CDD RX-CC_like 2 134 IPR038005 -
Amo16g0217 860 PANTHER DISEASE RESISTANCE PROTEIN RP 22 839 IPR044974 GO:0006952
Amo16g0217 860 SUPERFAMILY L domain-like 505 833 - -
Amo16g0217 860 Gene3D - 426 515 IPR036388 -
Amo16g0217 860 Pfam Rx N-terminal domain 11 98 IPR041118 -
Amo16g0217 860 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 441 IPR027417 -
Amo16g0217 860 Gene3D - 10 124 - -
Amo16g0217 860 Gene3D - 341 425 IPR042197 -
Amo16g0217 860 Gene3D - 149 334 IPR027417 -
Amo16g0217 860 PRINTS Disease resistance protein signature 378 392 - -
Amo16g0217 860 PRINTS Disease resistance protein signature 792 808 - -
Amo16g0217 860 PRINTS Disease resistance protein signature 197 212 - -
Amo16g0217 860 PRINTS Disease resistance protein signature 280 294 - -
Amo16g0217 860 Gene3D Ribonuclease Inhibitor 748 839 IPR032675 -
Amo16g0217 860 Gene3D Ribonuclease Inhibitor 524 743 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0217 Amo-Chr16 3310727 3313309 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0217 584 776 WRKY Transcription Factor Family AT4G12020 28.718 2.07e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0217 - - gmx:100777049 969.918