Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0216 ATGGCTGAATCATTCATCTTCAGCATCGCTGAATCACTCACTGCCAAGCTCGCTTCTCGTGCATATGAAGAAGCGTCTCGGGTGGTTGGTGTCTATGATGACCTTCAAGACTTGAAAAGCAGTCTCTCATATGTGAAAGCTGTGCTGTTGGATGCTGAGCAGAAGCAGGAGCGGAGCCACGAGCTGCGGGAGTGGCTGAAGCAGATCAAACTCATCTTCTATGATGCTGAGAACGTGCTTGATCAAGTTGACTGCCAAACATTGCGCAAGCAAGTCGTCAGAGCCTATGGTACTCCTAAAGACAAGGTAGGTCGCTTCTTCTCGAGTTCTAATCCACTTGTGTTTCGCTGGAAGATTGCTCAGCAGATCAAAGATATTACGCAGAGATTAGACAGAGTTGCGGCCAATAGAGATAAGTTTGGGCTTCAAACAATTGCAGTTGATAGGCGAGTTGTGCATAGGAGAGAAATGACTTACTCCCATGTTATTGAGTCTGATGTCATAGGAAGGGATCACGATAAAGAGAAGATCATAAAGCTCTTGATGGAACCGAGTCTTGACAACAACGATGGCTCTAAACATATCTCTGTGATTCCCATTGTGGGAATTGGAGGTTTGGGAAAGACCACACTTGCTAAGCTCGTCTTCAATGATAAGAGAGTAGGTGAGTCTTTCCCATTGAAAAGGTGGGTGAGTGTTTCTGATGATTTTAATATTAAATCATTGATTCTCAAAATCATCAATCCTCTCAGTGATTTTGCTTCTTCCACTAATGCTCCTGGGGGGCAACAAAACTTAATAGACTTACAGATAGAGCAATTGCAACATCGTCTAAGAAACATGCTTGAGGGTCGAAAGTTCCTGCTGGTGTTGGATGACGTATGGAATGAAGATCGTGTTAAATGGGTTGAGCTGCAACATCTCATTTCAGTGAGTGCTCAAGGAAGCAAAGTTATAGTCACAACACGTAGCCAGTCCATCGCTTCCATGATGGGTACCGTTGCCAACTCTTACCATTTGAAAAATCTTTCTCCCAAGGATTCATTGCGTTTGTTTGTTAGATGGGCTTTTAAAGAAGGAGAAGATGGAAAGCATCCGGATTTGATAATGATTGGAAGAGAAATCGTCAAAAAGTGCAAAGGAGTTCCTTTAGCTGTGAGAACATTGGGAAGTTCACTATTTTTCAAACACGAGATACAAGAGTGGGAAGCAATGAGAGACAAGGAGATTTGGAATTTGCCGCAAAAAGAGGATGATATCTTACCTGCATTAAAATTAAGCTATGATGAAATGCCATCCCATTTGAGGCAATGTTTTGCTTTGCTCTCCCTTTATCCAAAGAATCATGCATTTAATTCTTTTGACGTTGCTCCACTTTGGGGGGCAGCAGGTTTGCTTCCATTGCAAAGCAAAGATAAAACAATGCTAGAGGATGCCCACCAATATTTGAGTGACTTAATGACAAGATCTTTTCTCCATAACGTTGTTGACTGTGGCACCTTTTATGGATTTAAACTACATGATTTAGTGCATGATCTTGCAGTATACGTTTCAAAAGATGTGTGTCAATTGGTTAGTTCAAACACTCAGGACATACCAGAAAATGTGCTGCATTTGTCTTTTGTTGAGAATGGTTTGCCTTACAATTCCATCAAGACAAGCTTACAAGGTGTGAGAAGCATTCTATTTCCAGTCGACAATCAGGGAGCCAGTGAAGCTTTCTTGYATGCATGGGTGTCAAACTGCAGATACCTGCGATATTTGGATTTAAGTAATTCTACATGTGAGACTTTGCCTGAGTCAATTGTTTTGCGTCTTGATGGGTGTTCAAATCTTGAAACTGTACCAGAAAAGTTAAGAAAGTTGATCAGCCTGCAAAGATTGGAGATAACCACAAAGCAATCTATTTTGCCAGAGAGTGACATTGCAAAGTTGAATTGTCTTGAATATTTGTGTGTCCAAAATTGTGTTCATTTGGAGTCCTTGTTTGTTGGGACAAGATTGCCTACACTTCGAACTTTGGAAGTTACTGCTAGTGCGAGTCTAAAGTCTTTGCCACTTGATACTCACCATTTCCCTCAGTTAGAAACTTTGGGAATCAGCGGTGTTGTCAATGAAGATTGGCTTTATAGATCGGAGGATACTAATGCTGTCTTGAGGTTAAAAACCATTGTTCTTTATAAAATGGTAACGTTGCCTCATTCTCTCCAACGGTATGCAAGCACGTTACAAACTTTGGTGATTTCACGTTGCTACGAGCTGGAGGTACTTCCTGAATGGCTGTCGAATCTGAGTGCTTTGAAATTTCTTTATATCTGGGGTTGTCCAAAATTGATGTCTCTTCCCAGAGATATCCACCGTTTAACAAGTCTCCATCTTTTACAAATCATAAATTGCACTAAGTTGTATAGAAAATACGAGCCACAAGTTGGAGAGTGCTGGCCCATGATATCTCACATCAAGCATACTGACATTAGGAAGACATGGAATAGCTAA 2496 0.4119 MAESFIFSIAESLTAKLASRAYEEASRVVGVYDDLQDLKSSLSYVKAVLLDAEQKQERSHELREWLKQIKLIFYDAENVLDQVDCQTLRKQVVRAYGTPKDKVGRFFSSSNPLVFRWKIAQQIKDITQRLDRVAANRDKFGLQTIAVDRRVVHRREMTYSHVIESDVIGRDHDKEKIIKLLMEPSLDNNDGSKHISVIPIVGIGGLGKTTLAKLVFNDKRVGESFPLKRWVSVSDDFNIKSLILKIINPLSDFASSTNAPGGQQNLIDLQIEQLQHRLRNMLEGRKFLLVLDDVWNEDRVKWVELQHLISVSAQGSKVIVTTRSQSIASMMGTVANSYHLKNLSPKDSLRLFVRWAFKEGEDGKHPDLIMIGREIVKKCKGVPLAVRTLGSSLFFKHEIQEWEAMRDKEIWNLPQKEDDILPALKLSYDEMPSHLRQCFALLSLYPKNHAFNSFDVAPLWGAAGLLPLQSKDKTMLEDAHQYLSDLMTRSFLHNVVDCGTFYGFKLHDLVHDLAVYVSKDVCQLVSSNTQDIPENVLHLSFVENGLPYNSIKTSLQGVRSILFPVDNQGASEAFLXAWVSNCRYLRYLDLSNSTCETLPESIVLRLDGCSNLETVPEKLRKLISLQRLEITTKQSILPESDIAKLNCLEYLCVQNCVHLESLFVGTRLPTLRTLEVTASASLKSLPLDTHHFPQLETLGISGVVNEDWLYRSEDTNAVLRLKTIVLYKMVTLPHSLQRYASTLQTLVISRCYELEVLPEWLSNLSALKFLYIWGCPKLMSLPRDIHRLTSLHLLQIINCTKLYRKYEPQVGECWPMISHIKHTDIRKTWNS* 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0216 831 Gene3D - 148 336 IPR027417 -
Amo16g0216 831 Pfam Rx N-terminal domain 11 99 IPR041118 -
Amo16g0216 831 CDD RX-CC_like 2 134 IPR038005 -
Amo16g0216 831 PANTHER DISEASE RESISTANCE PROTEIN RP 27 785 IPR044974 GO:0006952
Amo16g0216 831 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 442 IPR027417 -
Amo16g0216 831 Gene3D Ribonuclease Inhibitor 521 712 IPR032675 -
Amo16g0216 831 Gene3D Ribonuclease Inhibitor 718 812 IPR032675 -
Amo16g0216 831 Gene3D - 427 516 IPR036388 -
Amo16g0216 831 Gene3D - 342 426 IPR042197 -
Amo16g0216 831 PANTHER OS08G0543100 PROTEIN 27 785 - -
Amo16g0216 831 SUPERFAMILY RNI-like 572 802 - -
Amo16g0216 831 PRINTS Disease resistance protein signature 197 212 - -
Amo16g0216 831 PRINTS Disease resistance protein signature 379 393 - -
Amo16g0216 831 PRINTS Disease resistance protein signature 281 295 - -
Amo16g0216 831 PRINTS Disease resistance protein signature 666 682 - -
Amo16g0216 831 Pfam NB-ARC domain 172 429 IPR002182 GO:0043531
Amo16g0216 831 Gene3D - 10 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0216 Amo-Chr16 3303916 3306504 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0216 195 788 WRKY Transcription Factor Family AT5G45050 22.720 1.67e-09 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0216 - - gmx:100777049 917.916