Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0161 ATGCTCCACATCACTTGCATGTTGCTCTTCTTCTTCCTCCTCTGCCCTCATCCCACACTCACACTCAACTCCGACGGCCTCTCCCTTCTGGCTCTCAAGGCTGCAGTCGACTCCGACCCCACCGGAGCCCTCTCCGCCTGGTCCGACACCGACCCAACCCCCTGCCGCTGGCCTGGCGTCCTCTGCTCCCCCAACAACCGTGTCACCCAACTCTCCCTACCAAACAAGTCTCTATCCGGCTACCTCCCCTCCGAGCTCGCATCCCTAACCTCCCTCTACCGCCTCTCTCTTCCGTACAACAACTTCTCAAGAACCATCCCTTCTCCTCTCTTCACTTCCCTCAACAAACTCCTCGTCCTCGACCTCTCTCACAACCAACTCACGGGTCCCATTCCCATCCAAGTCCGATCCCTCAAATGGCTCCGCCATTTCGATCTATCCTCCAACTCCCTCAATGACTCTCTTCCCCAAGAGCTTTCCGAACTCTCTTCCCTCGTCGGTACCTGCAATCTTTCATTTAACCACTTCTCCGGCGGGATTCCCCCCTCGCTCGGCAAGCTTCCGGTCATTGTCAGCCTCGACCTCCGTGGCAACAACCTCACCGGAAAAATACCACAGGTTGGCTCCCTGCTCAACCAGGGTCCTACCGCCTTCGCCGGAAACCCTGGCCTCTGTGGTTTTCCTCTCCAGAACTCGTGCCCGGAGTCTCAGAAACCTAACATTTTACCCGCAGATCAGCCTCAGAACCCAAAGGCACTTCGCGCCGGTGGCGCTGGCAGTGGCAGCGGTGCCGGAGAAGACGCGAAGGCTAAGGAACGTAGCGGCTCCGTTGCGGTCCTCGTGATCTCGGGTCTCTCCCTGGTGGTCGGCATAGTTTCTCTCTCGCTGTGGGTTTTCCGGCGACGGTGGAACAACGACGACGGCAAAATGAGGAGCAGAAAATTGAACAATGAGGTTATCGGCGGTGGAGAAGGAGGAGCAATAGGAGGAGGGGAGGGGCAACAAGGTAAATTCGTTGTGGTTGACGAAGGGTTTAACTTGGAACTCGAAGATTTGTTGAGAGCTTCTGCTTATGTCGTTGGGAAGAGTAGGAGCGGAATCGTGTACAAGGTCGTCGGAGTAGGGAAGGGTGGCACGTGTGCACCTCCGCCGCCGGCGACGGTTGTGGCGGTCCGGCGTCTCAGCGAGGGCGATGCCACGTGGCGGCTGAAGGATTTCGAGTCGGAGGTGGAGGCCATTGCGAAGGTTCGCCACCCAAATGTGGTTCCTTTAAGAGCTTATTACTTCGCAAATGATGAGAAGCTTCTCATCACGGATTTCATCCGCAATGGAAGCTTGCATGCGGCGTTGCACGGTGGATCTTCCAATTCAGTGCTGACATTATCATGGACAGCAAGGTTGAAAATTGCCCAAGAAGCAGCAAGGGGATTGATGTACATCCATGAGTTTGGTGGCCGGAAATATGTCCATGGCAACCTAAAATCAACCAAAATCTTATTGGACGATGATCTCTGCCCTTACATATCAGGTTTCGGACTAACCCGTCTTGGTTTGGGTACCACAAAGTCATCTGCATTGGCACCAAAACGGCAGAATTCTAGTGGATCCTCTACAATGGTTTCAAAGGCTGCAGCTTCTTCTAATAACTACTTGGCGCCTGAGGTTCGCATGGCAGGTGGCAGATTCTCTCAGAAATGCGATGTGTACTCTTTTGGCATAATTCTATTAGAACTTTTGACTGGTAAACTCCCGGATTTCGGACCAGAAAATGATGACATGGTGCTGGAGAGTTTTGTGAGGAAAGCATTCAGAGAGGAGCAGCCATTGTCCGAGATCATAGACCCGGCTCTTTTGCCCGAGGTTTATGCCAAGAAACAAGTTGTTTCTGCATTTCATGTGGCTCTGAACTGCACTGAACTGGATCCGGAACTGCGTCCTAGGATGAAAATTGTGTCTGAGAGCCTTGATCACATCAAGATTCAGTGA 1986 0.5332 MLHITCMLLFFFLLCPHPTLTLNSDGLSLLALKAAVDSDPTGALSAWSDTDPTPCRWPGVLCSPNNRVTQLSLPNKSLSGYLPSELASLTSLYRLSLPYNNFSRTIPSPLFTSLNKLLVLDLSHNQLTGPIPIQVRSLKWLRHFDLSSNSLNDSLPQELSELSSLVGTCNLSFNHFSGGIPPSLGKLPVIVSLDLRGNNLTGKIPQVGSLLNQGPTAFAGNPGLCGFPLQNSCPESQKPNILPADQPQNPKALRAGGAGSGSGAGEDAKAKERSGSVAVLVISGLSLVVGIVSLSLWVFRRRWNNDDGKMRSRKLNNEVIGGGEGGAIGGGEGQQGKFVVVDEGFNLELEDLLRASAYVVGKSRSGIVYKVVGVGKGGTCAPPPPATVVAVRRLSEGDATWRLKDFESEVEAIAKVRHPNVVPLRAYYFANDEKLLITDFIRNGSLHAALHGGSSNSVLTLSWTARLKIAQEAARGLMYIHEFGGRKYVHGNLKSTKILLDDDLCPYISGFGLTRLGLGTTKSSALAPKRQNSSGSSTMVSKAAASSNNYLAPEVRMAGGRFSQKCDVYSFGIILLELLTGKLPDFGPENDDMVLESFVRKAFREEQPLSEIIDPALLPEVYAKKQVVSAFHVALNCTELDPELRPRMKIVSESLDHIKIQ* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0161 661 ProSiteProfiles Protein kinase domain profile. 354 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo16g0161 661 Gene3D Transferase(Phosphotransferase) domain 1 441 661 - -
Amo16g0161 661 SUPERFAMILY L domain-like 25 230 - -
Amo16g0161 661 Pfam Protein tyrosine and serine/threonine kinase 385 653 IPR001245 GO:0004672|GO:0006468
Amo16g0161 661 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 6 661 - -
Amo16g0161 661 Gene3D Ribonuclease Inhibitor 15 75 IPR032675 -
Amo16g0161 661 Pfam Leucine rich repeat N-terminal domain 23 63 IPR013210 -
Amo16g0161 661 Gene3D Ribonuclease Inhibitor 76 241 IPR032675 -
Amo16g0161 661 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 6 661 - -
Amo16g0161 661 Gene3D Phosphorylase Kinase; domain 1 338 440 - -
Amo16g0161 661 MobiDBLite consensus disorder prediction 236 269 - -
Amo16g0161 661 Pfam Leucine rich repeat 91 151 IPR001611 GO:0005515
Amo16g0161 661 SUPERFAMILY Protein kinase-like (PK-like) 359 656 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0161 Amo-Chr16 2141538 2145399 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0161 22 659 Receptor kinase-like Gene Family AT3G57830 57.829 0.0 701
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Amo16g0161 PK_Tyr_Ser-Thr 2.2e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0161 - - adu:107492920 1191.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0161 16 2141538 2145399 Amo16g0161 16 2141538 2145399 ECH