Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0157 ATGGATTATTCTTTCTACATGTTCTCCTCCTCTTTATTTTTCTTCATTCTAACTCTTATTATCATCAAGTTCCGAAGCAAAATAAGAACCTCGAATTCCAGCAGCGATGAAATTCGACCCCAACAGCTACCATCTCCACCGTCACTTCCAATAATTGGACACCTTCATCTTCTAGGCTCAGTGATACCAAAGTCATTTCAAGCCTTGGCCAATCTCTATGGCCCTCTGATTCAGCTTCGTTTAGGTGCCTCAACTTGCATACTTGTTTCCAATGCCCATGTTGCAAGAGAAGTAATGAAAACCCATGAACTCAACTTTTGCTACCGCCCCAACTTCGGTTCCTCTGAGTATTTTCTTTATAAAGGGTCTTATTTTATTGCTGCACCATATGGGCCTTATTGGAGGTTCATGAAGAAGCTATGCGTGACTCAACTTCTCTCGAGTTCTCAGCTTGGGAGATTCATGCACGTGAGGGAACAAGAGATTAAGAAGCTCTTGAAATCACTTATGGTTTGTTCTAGTGAGGGCAGAGAGTGTGATTTGGGTTTTGAGCTTACTACTTTGACCAACAATATCCTATGTAGGATGGCCATGAGCACTACTTGTTTCGACAATAATGATGATGCTGTGGAGATTCATGGTTTGGTTAAGGAGTTTTTGGAGGTTGGTGCTAAGTTGAGCATTGGTGAGGTTCTTGGGCCTTTGGGGAAGTTTGATTTGTTTGGGTATGGGAAGAAGCTTGCGAAAGTAGTGGCCAAATTTGACCGCATCTTGGAAAGGATCATGGAGGAACATGAACATGATGGTGGTGATGATGAGGGAGAAACCACCTTGGATATGATGGATATTCTCTTAAGAGTTTATAGAGATCCAAACGCTCAGGTCAAGCTAACAAGGAATGACATCAAGGCTTTCTTCTTAGATATTTTTCTTGCGGGAACAGATACGTCTTCTGTGGCATTGCAATGGAGCATGGCAGAGATACTAAACCACCCAATAATACTGAACAAGCTGAGGGCAGAGATTGCTGCAGTGGTGGGGTCAACTAGGATGGTCAACGAATCGGACGTTCCAAATCTACCTTACCTCCAAGCTATTGTGAAGGAAGTGCTAAGGCTCCATCCAACGGCACCGTTTGCTCTTAGACAATCTGCTCAAGATTGCATCATCAATGGTTATGAAGTAAAGTCTCAAACAAGAACACTCATCAATGTCTATGCCATCATGAGAGACCCTCAATCTTGGGACAATCCTGAAAACTTTATACCCGAGAGGTTCTTGGAAACCACACATAATGACATCATCAAAATGAGTGTTAATGATTTTAGGTACATTCCATTTGGGTTCGGGAGGAGAGGATGCCCTGGATCTTCTCTTGCTTTAACGGTAATACAAACAACAATTGCAGCGTTGATCCAATGTTTTGATTGGAAAATCAAAGGGGGAGACAGGGTTAACATGGAAGAAGGGTCATCATTCTCTGCAGGGTTGGCTAAGCCACTACTTTGTTACCCTATCTTATGTTATAATCCCTTTTGA 1539 0.4243 MDYSFYMFSSSLFFFILTLIIIKFRSKIRTSNSSSDEIRPQQLPSPPSLPIIGHLHLLGSVIPKSFQALANLYGPLIQLRLGASTCILVSNAHVAREVMKTHELNFCYRPNFGSSEYFLYKGSYFIAAPYGPYWRFMKKLCVTQLLSSSQLGRFMHVREQEIKKLLKSLMVCSSEGRECDLGFELTTLTNNILCRMAMSTTCFDNNDDAVEIHGLVKEFLEVGAKLSIGEVLGPLGKFDLFGYGKKLAKVVAKFDRILERIMEEHEHDGGDDEGETTLDMMDILLRVYRDPNAQVKLTRNDIKAFFLDIFLAGTDTSSVALQWSMAEILNHPIILNKLRAEIAAVVGSTRMVNESDVPNLPYLQAIVKEVLRLHPTAPFALRQSAQDCIINGYEVKSQTRTLINVYAIMRDPQSWDNPENFIPERFLETTHNDIIKMSVNDFRYIPFGFGRRGCPGSSLALTVIQTTIAALIQCFDWKIKGGDRVNMEEGSSFSAGLAKPLLCYPILCYNPF* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0157 512 PANTHER CYTOCHROME P450, FAMILY 712, SUBFAMILY A, POLYPEPTIDE 1 8 512 - -
Amo16g0157 512 Pfam Cytochrome P450 44 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g0157 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Amo16g0157 512 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g0157 512 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g0157 512 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g0157 512 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g0157 512 SUPERFAMILY Cytochrome P450 39 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g0157 512 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g0157 512 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g0157 512 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g0157 512 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g0157 512 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g0157 512 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g0157 512 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g0157 512 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g0157 512 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 8 512 - -
Amo16g0157 512 Gene3D Cytochrome P450 28 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0157 Amo-Chr16 2092713 2095435 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0157 42 512 Cytochrome P450 AT2G42250 54.412 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0157 - - gmx:106794180 693.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0157 16 2092713 2095435 Amo12g1805 12 86367433 86374619 PCT
Amo16g0157 16 2092713 2095435 Amo02g1980 02 65329978 65333945 PCT
Amo12g1820 12 87023386 87025663 Amo16g0157 16 2092713 2095435 PCT
Amo02g1990 02 65482396 65486288 Amo16g0157 16 2092713 2095435 PCT