Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0154 ATGATGAAGATGATGTTTTCAGACATGGCTGATTTACAAGACTACACTGCAAAAGTGTTGCTAATAATATCCACCATGTTGGTTGTATCCATAATAATAAGGAGAAGAAGAAAACAAAATCAAATAAAGCTTCCACCGAGCCCACCATCCCTACCCATCATTGGACACCTCCACCTTCTCTCTCCATTACCGCACCAAGATTTCCACAAGCTCTCAACCACCTATGGACCCATCATCCACCTCTGCCTCGGCTCTGCCACTTGCGTGGTGGCTTCCACCGCTGAAGCCGCCAAAGAGTTCCTCAAAATCCACGAAACCTCCTTCTCCGACCGCCCCACAAAAACCGTAGCCGTGGAGAGCCTGTCCTATGGATTCAAAGACTTCGTGTTTGCCCCGTACGGACCCTATTGGAAGTTCATGAAGAAGGTGTGCATGTCGGAGCTCCTGGGCGGAAAAATGCTCCACCAGCTCCTCCACGTGAGGCAGCAAGAGAGGAAGAGGTTCCTTAGCGGTTTGGCAAAGAAAGGGTTGGCCGGTGAGGCAGTGGATGTTGGGGCAGAACTCATGATGCTGACCAACAACGTGATATCGATGATGACGATGAGGCAGAAGAGTTGTTCTGAGGGGAGAGGAGAAGCGGAGGCGCTGAGAAAGGTGGTGGAGGACACGGTGGAGCTGAGCGGGAAGTTCAACGTGTCGGATTTCTTGTGGTTCATGAAGAGTGTTGATGTTCAGGGATTCAAGAAGAGGCTGAAGGAGATTCGGGTAAGGTTCGATGCCTTGCTGGACAGAGTGATTGAGGAGCATCAACGTGAAAGAAGAAAGAAGAAGGAAGAGGGTTCGACGACCGGTGATGACGATGATGTTAAGGATATACTTGATGTCCTTCTTGACATATCCGAAGATGAAACTGCTGAAATCAAATTGGATACAGACAACATCAAAGCCTTCATCATGGACATACTGGTGGGGGGGACTGACACAACAGCTGTGACAATGGAGTGGGCGATGGCTGAATTAATCAACAATCCTGGCGTTATGGAGAAAGCACGTGAAGAGATCGATGCAGTTGTTGGAAATAAGAACAGGATCGTTGAAGAATGTGACATTCCCAACCTCCCTTACATACAAGCCATTGTGAAAGAAACACTAAGGCTTCACCCTCCAGGTGCATTGATCGTGAGGGAATGTTCTAGAACTGCCACGGTTGATGGCTATCACATTCCAGCAAGGACTCGTTTGTTTATCAATGCATGGTCCATTGGAAGGGACCCAAACCATTGGGAGAATCCCCTTGACTTCAGGCCTGAGAGGTTCATCGATCAAAATGGTAGTGCGTTGACTCATTTGGATGTTAGGGGTCAACACTTTGAGTTGATTCCGTTCGGGAGTGGAAGAAGAATGTGCCCTGGAATTTCTCTGGCTTTGCCGCTTGCATATGTGACACTGGCTTCGATGCTTCAGTGTTTTGAATGGAAGCTTGTCAATGGTGGTGATGATGGGATCGTTGACATGGAAGAGAAGGCTGGGCTTGTTGTTCCCAGGGCTCACCCTGTTATCTGTGTCCCTCTGCCTAGGCTTTATCAATTTCCATCTATATGA 1602 0.4831 MMKMMFSDMADLQDYTAKVLLIISTMLVVSIIIRRRRKQNQIKLPPSPPSLPIIGHLHLLSPLPHQDFHKLSTTYGPIIHLCLGSATCVVASTAEAAKEFLKIHETSFSDRPTKTVAVESLSYGFKDFVFAPYGPYWKFMKKVCMSELLGGKMLHQLLHVRQQERKRFLSGLAKKGLAGEAVDVGAELMMLTNNVISMMTMRQKSCSEGRGEAEALRKVVEDTVELSGKFNVSDFLWFMKSVDVQGFKKRLKEIRVRFDALLDRVIEEHQRERRKKKEEGSTTGDDDDVKDILDVLLDISEDETAEIKLDTDNIKAFIMDILVGGTDTTAVTMEWAMAELINNPGVMEKAREEIDAVVGNKNRIVEECDIPNLPYIQAIVKETLRLHPPGALIVRECSRTATVDGYHIPARTRLFINAWSIGRDPNHWENPLDFRPERFIDQNGSALTHLDVRGQHFELIPFGSGRRMCPGISLALPLAYVTLASMLQCFEWKLVNGGDDGIVDMEEKAGLVVPRAHPVICVPLPRLYQFPSI* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0154 533 PANTHER CYTOCHROME P450 FAMILY PROTEIN 12 530 - -
Amo16g0154 533 Coils Coil 347 367 - -
Amo16g0154 533 PRINTS E-class P450 group I signature 469 492 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g0154 533 PRINTS E-class P450 group I signature 377 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g0154 533 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g0154 533 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g0154 533 PRINTS E-class P450 group I signature 459 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g0154 533 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g0154 533 PRINTS E-class P450 group I signature 313 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g0154 533 PRINTS E-class P450 group I signature 333 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g0154 533 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 12 530 - -
Amo16g0154 533 Gene3D Cytochrome P450 29 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g0154 533 Pfam Cytochrome P450 45 518 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g0154 533 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g0154 533 PRINTS P450 superfamily signature 460 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g0154 533 PRINTS P450 superfamily signature 324 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g0154 533 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 462 471 IPR017972 GO:0005506|GO:0016705
Amo16g0154 533 SUPERFAMILY Cytochrome P450 45 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0154 Amo-Chr16 2035127 2037184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0154 9 526 Cytochrome P450 AT5G06900 45.857 6.32e-166 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0154 K24188 - gmx:100815706 655.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0154 16 2035127 2037184 Amo16g0154 16 2035127 2037184 ECH
Amo16g0154 16 2035127 2037184 Amo12g1820 12 87023386 87025663 PCT
Amo16g0154 16 2035127 2037184 Amo02g1990 02 65482396 65486288 PCT