Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0145 ATGAAATTTGTGATTTCTTTGGGCCTAAAGATATCCCGAAAGCCCAAAAACAGACAACCTACTGGGCTTCTGGCTTGCGTAATAATTGCAGCCTCAACAAAAACCCTAGCTCTTCATCATTTCTCCATTCGGTTTTGGAGCTTCAGCAGCAGCAGCAGTCACAGGAAAACTTCACCTCCGAAAATGCCGTTCAAGAGGTTCATTGAGATTGGAAGGGTTGCTCAGATCAACTACGGCAAAGAGCATGGGAGGCTAGTAGTCATTGTTGATGTCATCGACCAGAATAGGGCTCTTGTTGACGCCCCTGATATGGTCCGATCCCAAGTGAATTTCAAGAGGCTCTCGCTCACTGATCTTAAGGTTGATATTAAGAGGGTCCCCAGGAAGAAGGAACTCATTAAGGCCATGGAGGAAGCTGATGTCAAGAACAAGTGGGAGAAGAGCTCTTGGGGGAGGAAACTCATTGTCCAGAAGAGAAGGGCATCCCTCAATGACTTCGACAGGTTCAAGATTATGTTGGCTAAGATCAAGAGGGCAGCAACTGTTAGGCAAGAGCTTGCTAAGCTTAAGAAGAGTGCATCTTAA 585 0.4615 MKFVISLGLKISRKPKNRQPTGLLACVIIAASTKTLALHHFSIRFWSFSSSSSHRKTSPPKMPFKRFIEIGRVAQINYGKEHGRLVVIVDVIDQNRALVDAPDMVRSQVNFKRLSLTDLKVDIKRVPRKKELIKAMEEADVKNKWEKSSWGRKLIVQKRRASLNDFDRFKIMLAKIKRAATVRQELAKLKKSAS* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0145 194 PANTHER 60S RIBOSOMAL PROTEIN L14 62 193 IPR039660 GO:0003723|GO:0003735
Amo16g0145 194 CDD KOW_RPL14 68 140 IPR041985 -
Amo16g0145 194 Gene3D - 153 188 - -
Amo16g0145 194 Gene3D - 62 145 IPR014722 -
Amo16g0145 194 PANTHER RIBOSOMAL PROTEIN L14, PUTATIVE-RELATED 62 193 - -
Amo16g0145 194 Pfam Ribosomal protein L14 106 178 IPR002784 GO:0003735|GO:0005840|GO:0006412
Amo16g0145 194 SUPERFAMILY Translation proteins SH3-like domain 66 154 IPR008991 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0145 Amo-Chr16 1932191 1934665 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0145 62 194 Cytoplasmic Ribosomal Protein Gene Family AT4G27090 79.699 7.58e-76 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0145 K02875 - gmx:100499889 244.588