Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0142 ATGGCAGGGCCTTCTTTCTATGCCTCCTGTCTTTCCTCCTCCAGCAATTTGGGGACATCTTGGTTGGTATTAAAAACTCACAATGCAAGGGCCGTGCCAGGGAAACTACGCTGGAGGAGCGGTCTTACAATAAAAGCAGAAGTGAAGTTTGTTAATGCTGAACAAGCAAAGGAGCTTGTAACAGTTGATGGATATACTGTTCTAGATGTACGCGACAAAACTCAGTTTGAGAGAGCTCACATAAAATCCTGCTATCATGTGCCTCTCTTTGTTGAAAATCAAGACAATGATCCTGGTACCATTGTAAAAAGGACTCTGCACAATAATTTCTCTGGGTTGTTCTTTGGTTTACCATTCACCAAGCCGAATCCTAATTTTGTACAAACGGTCAAGAGTCAGTTTTCGCCCGAAACTAAACTTCTGGTTGTATGTCAGGAAGGACTGAGGTTTGTTTATGGCATCCTATGCGATTTCAATTCTTCATTATTTTTTATTGGCTTAAGAAATTACAAACATATGGTTCAAATTCTTGGCATGGGTTGTTGTGGAGTCGAACACTTGGGTTGCCTGTGGAACACTATTGGGACTCGTCACATAATCATCACATTCATCAAGTTCTTGGTGTGA 627 0.4131 MAGPSFYASCLSSSSNLGTSWLVLKTHNARAVPGKLRWRSGLTIKAEVKFVNAEQAKELVTVDGYTVLDVRDKTQFERAHIKSCYHVPLFVENQDNDPGTIVKRTLHNNFSGLFFGLPFTKPNPNFVQTVKSQFSPETKLLVVCQEGLRFVYGILCDFNSSLFFIGLRNYKHMVQILGMGCCGVEHLGCLWNTIGTRHIIITFIKFLV* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0142 208 CDD RHOD 55 89 - -
Amo16g0142 208 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 9, CHLOROPLASTIC 1 150 IPR044615 -
Amo16g0142 208 Gene3D - 49 174 IPR036873 -
Amo16g0142 208 ProSiteProfiles Rhodanese domain profile. 61 149 IPR001763 -
Amo16g0142 208 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 45 149 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0142 Amo-Chr16 1906328 1912439 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0142 14 149 Sulfurtransferasese or Rhodanese AT2G42220 61.765 2.75e-59 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0142 - - ccaj:109797004 241.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0142 16 1906328 1912439 Amo16g0142 16 1906328 1912439 ECH