Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0125 ATGAGGATCCGCAAAAGGCATGCGCTTTTATCTTCCTCCCACTTTCCGCCCACTCCTCCGTCAGATCCCCACCGCTCACCAGGGCTGGTGCAACTCACCACCGCAAATCTCCACCACCGACAACGTGGCTCCGATCATGGTGCTCAACCGTCTGATCAACCTGTCGCGCCTATCAACGGCTGGGATGATTCCTCCGGTGAGAGTGGGGCACACAGACAGCACATCAAGCAAGACCCTTCGGTGGAGGATGATTATGATTATGATGATGGAAGAAGAGAAGACAGTGGTGAAGACTCGGAGGACAAGAAAAGTAATCATTCCAGGAAAGGAAACATCTTTGGTTCTTCCCAAACACTGCCACCAGCACCACCGTTAAACCTTCAAGATGAGAGATGGTGTGAGGAAGAGAAAGCGATTCCTTTCAAGAAACGAAGAGGGAGCTTTGACAACATGGGAATAAGTGATGGTAAGAAGACGAAAGCGAGGATGAAGACGAAGATGAACAACAAGTGCAGTAATAGCAAGAGTGAAGAGGAGAAGGTGAAAGGGAAGAAGAAGAAGAAGGGGAGGGGCAGTGCAGTAATGGAAGGATCACGGTGCAGTCGTGTGAATGGAAGAGGTTGGAGGTGTTGCCAACAAACTCTTGTTGGTTACTCCCTCTGTGAGCATCACTTGGGCAAAGGAAGACTCAGAAGCATGACAAGTGTTCGAAACCGTTCTACAACAACAAAGGTGGTGGTGCAACAACAACAACAACAACAACAACAACAACATCCTCATGATCATGGTAATAATAATAATAATCCTTCATCTTCTTCTTCTTCTGATAAGCTCAGCGTGAAGACGATAATGGGTGGTAGTAGTAGCAACAAGAGGAAGATGAAGCAGCTTGGAATGGTGAAAGCTCGATCCATAAACAGCTTACTGGGCCAAACAACTAACACACCCATTGCGCACACTTAG 963 0.4756 MRIRKRHALLSSSHFPPTPPSDPHRSPGLVQLTTANLHHRQRGSDHGAQPSDQPVAPINGWDDSSGESGAHRQHIKQDPSVEDDYDYDDGRREDSGEDSEDKKSNHSRKGNIFGSSQTLPPAPPLNLQDERWCEEEKAIPFKKRRGSFDNMGISDGKKTKARMKTKMNNKCSNSKSEEEKVKGKKKKKGRGSAVMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRNRSTTTKVVVQQQQQQQQQQHPHDHGNNNNNPSSSSSSDKLSVKTIMGGSSSNKRKMKQLGMVKARSINSLLGQTTNTPIAHT* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0125 320 MobiDBLite consensus disorder prediction 109 123 - -
Amo16g0125 320 Pfam WRC 196 236 IPR014977 -
Amo16g0125 320 ProSiteProfiles WRC domain profile. 194 238 IPR014977 -
Amo16g0125 320 MobiDBLite consensus disorder prediction 146 162 - -
Amo16g0125 320 MobiDBLite consensus disorder prediction 146 194 - -
Amo16g0125 320 MobiDBLite consensus disorder prediction 67 81 - -
Amo16g0125 320 PANTHER OS02G0773600 PROTEIN 22 315 - -
Amo16g0125 320 MobiDBLite consensus disorder prediction 232 294 - -
Amo16g0125 320 MobiDBLite consensus disorder prediction 233 294 - -
Amo16g0125 320 PANTHER - 22 315 IPR031137 GO:0005634|GO:0006351|GO:0032502
Amo16g0125 320 MobiDBLite consensus disorder prediction 1 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0125 Amo-Chr16 1591692 1593726 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0125 189 280 GRF Transcription Factor Family AT3G52910 33.696 8.66e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0125 - - aip:107645407 474.552