Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0117 ATGCACGACGATGATTATCTAGTGTTGGAGGATGAAAGCGGGAGAGTTAAGCTTGGCGGGGATATCATATCGCCTTCTGTGTTTGTAACAGGAATTGTGGTTGCCTTACATGGAAAGGAAACGGGGGCAGGTGATTTTTCGGTTTTGGAAGTCCTAGAAGCTGGCCTACCACCACAGATAGAATTCCCTCTTAAATCAAGGGAAGACAAATACATTGTTCTTGTGTCTGGATTAAATGTGGGGAGCAGTGATTCTAATCCTCTTCAGCTTCAGCTTTTCATTGATCATATTACAGGGCATTTAGGAGATGAAAAGGAGCAAAGTATTGCATCTCAAATTGTTCATGTTGTCATTGCTGGAAATTCTATTGGCATACCACGTGGACTTGTTAATGGACAGAATTTGGCTTCAAAGGATCTCTCAAGGATTGCTGAACCAATAAAGGAACTGGATATTTTATTGAATCAGATTGCAGCTGGTTTGCCTTTGGATATCATGCCAGGACCCAACGACCCTGCTAATTTCTCATTACCACAGCAGCCATTGCATAGATGCCTTTTTCCTGGTTCGGCAGCTTATAACACCTTTAGATCTTGTACAAATCCTCATTCTTTTGAGATTGATAATATTAGGTTTCTTGGCACGTCAGGTCAGAATGTAGATGATCTTGAGAAATATTCTGATGCAAAAGATAAACTTGAATTCATGGAAAGGACGCTAAGGTGGAGGCATTTAGCACCTACAGCACCTAATACTCTAGGATGCTATCCTTATACTGATAGTGATCCCTTCTTCATTGAGAGTTGTCCTCATGTGTACTTTGTTGGCAATCAGGATAAATATGAATCTCGTGTCATAAAGGGATCTGAAGGGCAGTTTGTGAGACTCATAAGCGTCCCGAAATTCAGTGAATCTGGCGTTGCAGTTGTGGTTATGGGAAATTTGTTGAATGCCTGCCATCTGTCTGTATCTTCAAGATGGATCGAAGACCTGAAAATTAAGGCTTAA 1008 0.4117 MHDDDYLVLEDESGRVKLGGDIISPSVFVTGIVVALHGKETGAGDFSVLEVLEAGLPPQIEFPLKSREDKYIVLVSGLNVGSSDSNPLQLQLFIDHITGHLGDEKEQSIASQIVHVVIAGNSIGIPRGLVNGQNLASKDLSRIAEPIKELDILLNQIAAGLPLDIMPGPNDPANFSLPQQPLHRCLFPGSAAYNTFRSCTNPHSFEIDNIRFLGTSGQNVDDLEKYSDAKDKLEFMERTLRWRHLAPTAPNTLGCYPYTDSDPFFIESCPHVYFVGNQDKYESRVIKGSEGQFVRLISVPKFSESGVAVVVMGNLLNACHLSVSSRWIEDLKIKA* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0117 335 CDD MPP_PolD2_C 71 311 IPR041863 -
Amo16g0117 335 Pfam DNA polymerase delta subunit OB-fold domain 2 51 IPR040663 -
Amo16g0117 335 PANTHER DNA POLYMERASE DELTA SUBUNIT 2 1 312 IPR024826 -
Amo16g0117 335 Gene3D - 63 330 - -
Amo16g0117 335 Gene3D - 1 54 - -
Amo16g0117 335 Pfam DNA polymerase alpha/epsilon subunit B 72 280 IPR007185 GO:0003677|GO:0006260
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0117 1 326 Core DNA Replication Machinery Family AT2G42120 74.085 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0117 K02328 - gmx:100780072 549.28