Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0104 ATGGCAGGGCCTTCTTTCTATGCCTCCTGTCTTTCCTCCTCCAGCAATTTGGGGACATCTTGGTTGGTATTAAAAACTCACAATGCAAGGGCCGTGCCAGGGAAACTACGCTGGAGGAGCGGTCTTACAATAAAAGCAGAAGTGAAGTTTGTTAATGCTGAACAAGCAAAGGAGCTTGTAACAGTTGATGGATATACTGTTCTAGATGTACGCGACAAAACTCAGTTTGAGAGAGCTCACATAAAATCCTGCTATCATGTGCCTCTCTTTGTTGAAAATCAAGACAATGATCCTGGTACCATTGTAAAAAGGACTCTGCACAATAATTTCTCTGGGTTGTTCTTTGGTTTACCATTCACCAAGCCGAATCCTAATTTTGTACAAACGGTCAAGAGTCAGTTTTCGCCCGAAACTAAACTTCTGGTTGTATGTCAGGAAGGACTGAGGTCTGCCGCAGCTGCAAATAAACTAGAGCAGGCCGGTTTCTCAAATGTAGCATGCATAACATCTGGCCTTCAAACTGTAAAACCAGGTACATTTGATTCTGTGGGATCCAAGGACTTGCAAGATGCCGGCAAAGCTGGTTTGGTGACAATCCAAGGGAAAATCTCAACTGTATTGGGAACAATTCTTGTTTGTGCATATTTGTTCATTACCTTCTTTCCTGACCAAGCTGAGAAGATATTCCAACTGGTCCCTGCAGGCTAA 708 0.4336 MAGPSFYASCLSSSSNLGTSWLVLKTHNARAVPGKLRWRSGLTIKAEVKFVNAEQAKELVTVDGYTVLDVRDKTQFERAHIKSCYHVPLFVENQDNDPGTIVKRTLHNNFSGLFFGLPFTKPNPNFVQTVKSQFSPETKLLVVCQEGLRSAAAANKLEQAGFSNVACITSGLQTVKPGTFDSVGSKDLQDAGKAGLVTIQGKISTVLGTILVCAYLFITFFPDQAEKIFQLVPAG* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0104 235 SMART rhod_4 51 181 IPR001763 -
Amo16g0104 235 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 45 173 IPR036873 -
Amo16g0104 235 ProSiteProfiles Rhodanese domain profile. 61 184 IPR001763 -
Amo16g0104 235 Pfam Rhodanese-like domain 53 173 IPR001763 -
Amo16g0104 235 CDD RHOD 55 176 - -
Amo16g0104 235 Gene3D - 49 179 IPR036873 -
Amo16g0104 235 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 9, CHLOROPLASTIC 1 234 IPR044615 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0104 Amo-Chr16 1362012 1364835 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0104 9 229 Sulfurtransferasese or Rhodanese AT2G42220 66.968 7.61e-113 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0104 - - ccaj:109797004 392.504