Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0097 ATGAGGATCCGCAAAAGCCATGCGTTTTTATCTTCCCCCCACTTTCCGCCCACTCCTCCGTCAGATCCCCACCGCTCACCAGGGCTGGTGCAACTCACCACCGCAAATCTCCACCACCGACAACGTGGCTCCGATCATGGTGCTCAACCGTCTGATCAACCTATCAACGGCTGGGATGATTCCTCCGGTGAGAGTGGGGCACACAGACAGCACATCAAGCAAGACCCTTCGGTGGAGGATGATTATGATTATGATGATGGAAGAAGAGAAGACAGTGGTGAAGACTCGGAGGACAAGAAAAGTAATCATTCCAGGAAAGGAAACATCTTTGGTTCTTCTCAAACACTGCCACCAGCACCACCGTTAAACCTTTATTCTTCGACTCCTCTTCAAGATGAGAGATGGTGTGAGGAAGAGAAAGCGATTCCTTTCAAGAAACGAAGAGGGAGCTTTGACAACATGGGAATGAGTGATGGTAAGAAGACGAAGGCGAGGATGAAGACGAAGATGAACAACAAGTGCAGTAATAACAACAAGAGTGAAGAGGAGAAGGTGAAAGGGAAGAAGAAGAAGAAGGGGAGGGGCAGTGCAGTAATGGAAGGCTCACGGTGCAGTCGTGTGAATGGAAGAGGTTGGAGGTGTTGCCAACAAACTCTTGTTGGTTACTCCCTCTGTGAGCATCACTTGGGCAAAGGAAGACTCAGAAGCATGACAAGTGTTCGAAACCGTTCTACAACAACAAAGGTGGTGGTGCAACAACAACAACAACATGCTCATGATCGTGGTAATAATAATAATAATCCTTCATCTTCTTCTTCTTCTGATAAGCTCAGCGTGAAGACGATAATGGGTGGTGGTAGTAGCAACAAGAGGAAGATGAAGCAGCTTGGAATGGTGAAAGCTCGATCCATAAACAGCTTACTGGGCCAAACAACTAACACACCCATTGCGCACACTTAG 960 0.476 MRIRKSHAFLSSPHFPPTPPSDPHRSPGLVQLTTANLHHRQRGSDHGAQPSDQPINGWDDSSGESGAHRQHIKQDPSVEDDYDYDDGRREDSGEDSEDKKSNHSRKGNIFGSSQTLPPAPPLNLYSSTPLQDERWCEEEKAIPFKKRRGSFDNMGMSDGKKTKARMKTKMNNKCSNNNKSEEEKVKGKKKKKGRGSAVMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRNRSTTTKVVVQQQQQHAHDRGNNNNNPSSSSSSDKLSVKTIMGGGSSNKRKMKQLGMVKARSINSLLGQTTNTPIAHT* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0097 319 MobiDBLite consensus disorder prediction 148 165 - -
Amo16g0097 319 Pfam WRC 200 240 IPR014977 -
Amo16g0097 319 PANTHER - 24 314 IPR031137 GO:0005634|GO:0006351|GO:0032502
Amo16g0097 319 PANTHER OS02G0773600 PROTEIN 24 314 - -
Amo16g0097 319 MobiDBLite consensus disorder prediction 241 285 - -
Amo16g0097 319 ProSiteProfiles WRC domain profile. 198 242 IPR014977 -
Amo16g0097 319 MobiDBLite consensus disorder prediction 1 130 - -
Amo16g0097 319 MobiDBLite consensus disorder prediction 241 292 - -
Amo16g0097 319 MobiDBLite consensus disorder prediction 148 198 - -
Amo16g0097 319 MobiDBLite consensus disorder prediction 64 78 - -
Amo16g0097 319 MobiDBLite consensus disorder prediction 106 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0097 Amo-Chr16 1313824 1315889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0097 193 279 GRF Transcription Factor Family AT3G52910 32.292 3.60e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0097 - - aip:107645407 513.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0097 16 1313824 1315889 Amo16g0097 16 1313824 1315889 ECH