Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0096 ATGTTTTGTTCCATAATTTTCTCAGTGCTAATAACAACACTTGTTCATGAATCAAATGCTCAATTGAGTTCAAGCTTCTACAGCAGCACATGCCCCAACGTGTCTTCCATTGTGAGGAGTGTGGTTCAGCAAGCTTTGCAATCTGATTCTCGCATTGGCGCAAGCCTAACTCGCCTTCATTTCCATGATTGCTTTGTTAATGGGTGTGATGCATCAGTTTTGTTGGACCAAGGTGGCAACATAACACTGAGCGAGAAGGGTGCAGTTCCAAACAATAATTCAGCTCGTGGGTTTGATGTAGTTGATAAAATCAAGAGTGCTGTTGAAAATTCATGCCCTGGTGTTGTGTCTTGTGCTGACATTCTTGCTCTTGCGGCTGAAGCTTCTGTCTCTCTGGGAGGAGGTCCTTCATGGAACGTTGTTCTTGGGAGAAGGGATGGTGTAATTGCAAACCAATCAGGAGCGAATAATTCGATTCCAACTCCATTTGAAAGCTTAGCGAACATCACAGCAAAATTTGCTGCTGTTGGACTCAATATAACTGATCTCGTTGCATTATCCGGTGCACACACATTCGGGCGAGCACAATGTAGATTTTTCAACCAGAGACTCTTCAACTGGAGCGGCACAGGGAGCCCTGATCCCACTCTGAGCCCGTCGTATGTGGCGAGCCTTCAGCAGAGCTGTCCGCAGAATGGAAGCAGTGGGACCACACTCAACAACCTGGACCCTTCATCTCCGGACACCTTCGACAACAACTACTTCTCGAACCTCATCAACAACCGTGGCCTCCTCCAGACGGATCAGGAGCTCTTCTCCTCCAACAACAGCGTCACCATCTCCCTTGTGAACAGCTTCGCCGGCAACCAGACCGCCTTCTTCGAAGCCTTTGCTGAGTCCATGATCAACATGGCCAACATTAGCCCTTTGACTGCACCCCAGGGTCAAATCAGGTCCAATTGTAGGAAACTCAATTAG 978 0.4785 MFCSIIFSVLITTLVHESNAQLSSSFYSSTCPNVSSIVRSVVQQALQSDSRIGASLTRLHFHDCFVNGCDASVLLDQGGNITLSEKGAVPNNNSARGFDVVDKIKSAVENSCPGVVSCADILALAAEASVSLGGGPSWNVVLGRRDGVIANQSGANNSIPTPFESLANITAKFAAVGLNITDLVALSGAHTFGRAQCRFFNQRLFNWSGTGSPDPTLSPSYVASLQQSCPQNGSSGTTLNNLDPSSPDTFDNNYFSNLINNRGLLQTDQELFSSNNSVTISLVNSFAGNQTAFFEAFAESMINMANISPLTAPQGQIRSNCRKLN* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0096 325 CDD secretory_peroxidase 21 323 IPR033905 GO:0004601|GO:0042744
Amo16g0096 325 Gene3D - 26 325 - -
Amo16g0096 325 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo16g0096 325 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo16g0096 325 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo16g0096 325 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo16g0096 325 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo16g0096 325 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo16g0096 325 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo16g0096 325 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo16g0096 325 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo16g0096 325 Gene3D Peroxidase, domain 2 160 304 - -
Amo16g0096 325 SUPERFAMILY Heme-dependent peroxidases 21 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Amo16g0096 325 Pfam Peroxidase 38 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo16g0096 325 PANTHER PEROXIDASE 72-RELATED 6 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo16g0096 325 ProSiteProfiles Plant heme peroxidase family profile. 21 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo16g0096 325 PANTHER PEROXIDASE 6 325 - -
Amo16g0096 325 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo16g0096 325 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo16g0096 325 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo16g0096 325 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo16g0096 325 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo16g0096 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0096 Amo-Chr16 1293704 1295310 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0096 9 325 Peroxidase AT5G06720 68.770 4.45e-160 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0096 K00430 - gmx:100810355 532.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0096 16 1293704 1295310 Amo16g0096 16 1293704 1295310 ECH