Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0070 ATGGTGATTTCCAAGTCACCCCAAGGAGTGGTTGCCACTTCTTCAGTTATATCAAACCACTTTGTTTTGAAGCCCGCTGCCTCTCCTCCAACCTGTAAGAATGCAAGGGGAGTGAAAGAAATGGTAAGGGACCTCCTCTTTTCAGCACCAGATTTGGTTATGTTACCCATCTCAAGTGCATATCTATCTGGGCGTAAACGGGAGTCCGATGGCAAGAGTTTTCTTGGAGCTGTGTCGAAACTGTTTAATTTGTGCGCAAAGTATGTTGTGAGGGCAAAGAAGAAGGACACAGGAACCGTGTATGCGATGAAGATCATGGACAAAAAATTCATTACTAAAGAGAACAAAACAGCCTACGTGAAGTTGGAACGTATAGTTCTCGATCAATTGGATCATCCTGGAATTGTGCGCCTATATTTCACATTTCAAGACACTTTTCCATTGAGGGAAAAATTTTTCCTGGGGGTTCCCAAGATTCAAGATAAATAA 489 0.4254 MVISKSPQGVVATSSVISNHFVLKPAASPPTCKNARGVKEMVRDLLFSAPDLVMLPISSAYLSGRKRESDGKSFLGAVSKLFNLCAKYVVRAKKKDTGTVYAMKIMDKKFITKENKTAYVKLERIVLDQLDHPGIVRLYFTFQDTFPLREKFFLGVPKIQDK* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0070 162 PANTHER SERINE/THREONINE-PROTEIN KINASE 87 148 - -
Amo16g0070 162 PANTHER 3-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1 87 148 - -
Amo16g0070 162 SUPERFAMILY Protein kinase-like (PK-like) 88 145 IPR011009 -
Amo16g0070 162 Gene3D Phosphorylase Kinase; domain 1 76 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0070 Amo-Chr16 913267 915289 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0070 89 148 AGC Kinase Gene Family AT5G04510 88.333 1.39e-31 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PDK1 Amo16g0070 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0070 K06276 - egr:104421748 118.627