Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0066 ATGGGTATTGCTATTGCCTTCTATTTTGGAGCCAGATTTGGGTTTGATAAAGCTGATAGGAAACGCCTTTTCAATATGATTAATGAAGTGCCCACAATATTTGAAGTTGTTACTGGTGCAGCCAAGAAACAAGTGAAGGAGAAGTCTTCAGTTTCGAACCATAGTGGCAGCAAATCAAAGTCCAACTTTAAAGCAGTAAATATTTTTCTCCTTGCACTTACACATGGAAATCATGTATTTTTTGTCTGTGCTTGTTTCTTTGAGCGTGAGAAACTCATGTACGTTTTTCCAGTCTGTTGA 300 0.3767 MGIAIAFYFGARFGFDKADRKRLFNMINEVPTIFEVVTGAAKKQVKEKSSVSNHSGSKSKSNFKAVNIFLLALTHGNHVFFVCACFFEREKLMYVFPVC* 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0066 99 Pfam Alfin 3 39 IPR021998 GO:0006355|GO:0042393
Amo16g0066 99 PANTHER CPG BINDING PROTEIN 3 64 IPR045104 GO:0006355|GO:0042393
Amo16g0066 99 PANTHER ALFIN-LIKE TRANSCRIPTION FACTOR 3 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0066 Amo-Chr16 876540 877589 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0066 3 70 Alfin-like Transcription Factor Family AT5G20510 63.235 4.24e-28 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0066 - - gmx:100170700 112.464