Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0060 ATGGCTGGAAGTAATGAAGTCAACCTGAATGAGTCTAGGAGTGTCGTTCCGTTGAACACGTGGGTTCTGATATCGAATTTCAAGCTAGCTTACAATCTGTTAAGGAGAGCAGATGGAACTTTCAACAGAGAATTAGCAGAGTTTCTTGACCGCAAAGTTCCATCCAATTCCATCCCCGTCCACGGCGTCTGGTCCTTCGATCATGTCGATCAGAGAATCCCCGGCCTATTCTACCGTCTATACCTTCAGGACTCTCATCAACGGGGATGTGCCGGCGCCACCGTAATCCCCGACATGGACAAGCCTCTCAGCACCACCGACATCGTCCCCGTCATAATCTTCTTCCACGGCGGAAGCTTCTCTCATTCCTCCGCCAACAGCGCAATCTACGACACTTTCTGCCGCCGTCTCGTCAATGTAAGCAATTCCGTCGTCGTCTCCGTCAACTACCGCCGTTCACCGGAGCATCGCTTTCCCTGCGCCTACGAGGACGGCTGGACCGCCCTGGAGTGGGTCAGATCGAGAAAATGGCTCCGGAGCGGAAGATCCGAATCGGAATCGGAATCGAAGGTTTATGTATACATGGCGGGTGACAGTTCCGGTGGAAACATAGTTCACCACGTGGCGGTGAGAGCGGCGGAGGAAGGAATCGAGGTTCTCGGTAACATCCTTCTTCATCCACTGTTCGGTGGAGAGAAGAGGACCGAGTCAGAGATAAGGCTTGATGGAAAGTATTTCGTGAAGCTTCAAGATCGAGATTGGTATTGGCGGGCTTTTCTTCCTGAAGGAGAAGATAGAGACCACCCTGCTTGTAACCCGTTTGGGCCCAGGGGTAGGTCCCTTAAGGGCTTAACCTCATTCCCTAAGACTCTTGTTTGTGTTGCTGGTTTGGATCTTCTCCAAGATTGGCAATTGGCTTATGCCAATTCCCTTAGCTCCTTTTCTCACCATGTCAATCTTCTTTACCTTAAGGATGCCACCATTGGTTTCTACTTCTTGCCAAACAATGATCATTTCTCTTCTCTCATGGATCAGATCAACAACTTCGTCAACCCTAACTGTTAA 1065 0.5023 MAGSNEVNLNESRSVVPLNTWVLISNFKLAYNLLRRADGTFNRELAEFLDRKVPSNSIPVHGVWSFDHVDQRIPGLFYRLYLQDSHQRGCAGATVIPDMDKPLSTTDIVPVIIFFHGGSFSHSSANSAIYDTFCRRLVNVSNSVVVSVNYRRSPEHRFPCAYEDGWTALEWVRSRKWLRSGRSESESESKVYVYMAGDSSGGNIVHHVAVRAAEEGIEVLGNILLHPLFGGEKRTESEIRLDGKYFVKLQDRDWYWRAFLPEGEDRDHPACNPFGPRGRSLKGLTSFPKTLVCVAGLDLLQDWQLAYANSLSSFSHHVNLLYLKDATIGFYFLPNNDHFSSLMDQINNFVNPNC* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0060 354 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 112 128 IPR002168 GO:0016787
Amo16g0060 354 Gene3D alpha/beta hydrolase 1 351 IPR029058 -
Amo16g0060 354 PANTHER GIBBERELLIN RECEPTOR GID1C-LIKE PROTEIN 2 351 - -
Amo16g0060 354 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 193 205 IPR033140 -
Amo16g0060 354 PANTHER ARYLACETAMIDE DEACETYLASE 2 351 - -
Amo16g0060 354 Pfam alpha/beta hydrolase fold 112 331 IPR013094 GO:0016787
Amo16g0060 354 SUPERFAMILY alpha/beta-Hydrolases 101 351 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0060 Amo-Chr16 834285 836470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0060 1 351 Carbohydrate Esterase AT3G63010 70.370 0.0 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0060 K14493 - gmx:100788435 533.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0060 16 834285 836470 Amo16g0060 16 834285 836470 ECH
Amo16g0060 16 834285 836470 Amo12g2712 12 112593170 112596284 ECH
Amo16g0060 16 834285 836470 Amo06g0438 06 6236751 6238798 hybridization
Amo16g0060 16 834285 836470 Amo12g2712 12 112593170 112596284 PCT
Amo12g2712 12 112593170 112596284 Amo16g0060 16 834285 836470 PCT