Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0044 ATGGTATTGAAATCCTTAAAAGCATCATTTTTTCGTAGACTGCTTCAATCCCGGAATCTTGACCTTATAGATGGAATTGCAGCACCATATTCCTTAGTATTGGTCAAAGCATTTACCCTTCTTGAGTCCAAGTGGGAAAAACTATGTCATGATCTTGAACGTGGTTTCCCAAGTCATGAAATCTCAGATGTTGCAATGAGGGAAGCTGTAACAGAAACACTTGGAGGGCCTCAACCTGAATTGTCAAACAGAATAAGGCAAATTTGTGAAGATAATGGCAATGATTGGAGTGGAATTGCACATAGATTGTGGCAAAACGTTCGATATATAAAGTGTGTTAGCACTGGAATCATGAAGCAATATTATCCAAAGGTAAAGTATTATGCAGGAGAAGTACCTGTTGTAGGAGGGGATTACTTTGCTTCTGAGTGTAGTGTTGGTTTGAACTTAGACATAATGCAACCCCCTGAGACTACAAGATATGTGTTGTTTCCAAATACTGCTTACTTTGAGTTTCTTCCATTTAACATGAATGATGAAACCAATAACAATGTTGCTGACGAAATGTTTGATCATAGCAGTGTAGAGGTTAGGAAGATGTATGAAATAGTTGTTACTACTTATGGCGGATTCTATCGCTATCGTTTAGGTGATGTAGTGCGAATTCTTGGCTTCTATAATTCTTCTCCAGAAGTGGAGTTTGTGATGAGAGCACCTAAAGCTGCATCTGAGATTCTAACTGAGAGAGACTTGATTTCAGCAATTGATAACTTTCAACTTTCACTAAGAGGTGCCATGATGAGAACACAGATAGTTGAGTTTGCAAGTTTCTTAGACCAAGAATCAAGGCCGAAGCAGTTGAAGGTGTTCGTAGAAGTTCAAGAGGAATCTGATTTCATGGAGGATAAACAAGAGGAATCAATTAGGACATTGAGAAGTTGTATTACCTCACTTGAAGGTAGCTTGGGAGCCTTGTACAAAGTGGAGAAGGTTAAAGGTCAACTTGGGAACTAA 1014 0.3876 MVLKSLKASFFRRLLQSRNLDLIDGIAAPYSLVLVKAFTLLESKWEKLCHDLERGFPSHEISDVAMREAVTETLGGPQPELSNRIRQICEDNGNDWSGIAHRLWQNVRYIKCVSTGIMKQYYPKVKYYAGEVPVVGGDYFASECSVGLNLDIMQPPETTRYVLFPNTAYFEFLPFNMNDETNNNVADEMFDHSSVEVRKMYEIVVTTYGGFYRYRLGDVVRILGFYNSSPEVEFVMRAPKAASEILTERDLISAIDNFQLSLRGAMMRTQIVEFASFLDQESRPKQLKVFVEVQEESDFMEDKQEESIRTLRSCITSLEGSLGALYKVEKVKGQLGN* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0044 337 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 17 336 IPR004993 -
Amo16g0044 337 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE GH3.6-RELATED 17 336 - -
Amo16g0044 337 Pfam GH3 auxin-responsive promoter 21 336 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0044 Amo-Chr16 724484 725714 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0044 26 332 EF-hand Containing Proteins AT1G23160 34.185 8.17e-59 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0044 K14487 - aip:110263097 539.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0044 16 724484 725714 Amo16g0044 16 724484 725714 ECH
Amo16g0044 16 724484 725714 Amo06g0666 06 9486408 9494724 hybridization