Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0005 ATGGATATGAAAACAATATTTCATTCAACCGGAGTTTCTGTGTTTGCCTTCTTAATCTTTCTCTCAGTGTTCTTGGATTCTTCCTTGATTGTTTCTACTGCACCTAATGACCTACCACAAGTGGAATGTGCTTTGAATTTCACGACATACCCGTTGGTGGCATCGTTTGGTGAGTGTTGGAATGTCCAAGAGAATATAAGCAGCTGGACCGCAGATGGCTTCCCGGCCACCATGTGTTGCCGCAATGCCCTCACAGCTTTGTCGGAGGCACTGGCCTTGCATAATCACAGCCTACATGGACCACTCTTCGTTTCCCCGCGTCAATGGCAGAACTGCAGCACCTTATTCTACTCCCAATATAAGATGCCAGCACACTCGTGTGGCTTTGACGCGTTGTTCATGGACAAGGAAATCTACCATTGCTCCAACTTGGCTATGCAAGATGTTGCATCCATGCCGCAGTACCAAGATACCTTGAACCAATGCTCACACTTCGATCAACCGTTTGTTGAGGCATGTCCGGATTGTACCACTGCAATATTGAGCCTGAGAGACGCTTTGAACGGAGGCAACGGAGATGGCGCAGACAGAGCCGTATGCGGGGTGGCAGCTCTTGTTGCTGTTATGGGTGGCAAACAAAATGACCCATCTCTCGCTGACAAATTCTTACGCTGCTTGCCACCGATTTCGGTCAAAAAATCAAAATATTCGGCAAGTCTAGTGTTAATAAGCGTGCCAGTAGTGGTGGTAGTATTGTTGTTGATAGCTCTACTGGTAAAGTATACACACAAGAAGAAGAAGCAGCCATTGAGGCCATTTCAATTGAAGGAGATAACATCATGGGCAGGACTATACTGCTTCACGAAACAAGAAATCGAAAAGGCAATGAATTACGGGGATGAGAAGATATGCCTAGGACGCGGAAGTGCCGGGCAGGTTTACAGAGGCGTTCTCCCCAGCGGTCAGCTTGTTGCCATCAAGCATTTGACCAAGAGCAGCCCTTCTGATTCATTCACTCGGGAGATTCAAGGCCTTTCTAGACTTCGCCATCCGAACCTTGTTTGTCTTTTTGGTTGTTGCATTGAAGGTGACGAGAAATATTTAGTTTATGAATTTTGTGCTAACGGAAATCTAGCTCAACATCTACTAAAAAAAGACTGCCATTTGAATTGGGAAACAAGAGTGAAAATTTTGAGGGATTGTTCATATGCACTAAAGTATCTCCACCATCATATAGAAGGCTGCGTTGTCCATAGAGATATAAAGCTGACAAACATACTTCTGACGGAGGAATACCAAGCGAAACTGTCGGATTTCGGATTGGCAAGGATGATGGGGGTAGAAGAGAGCAAGGTATTCACAGACATTAGAGGGACAATAGGGTACATGGATCCTGAGTACATGAGCAATGCGAAGCTAACCTGTGCAAGTGACGTGTACAGTTTTGGGATTGTGGCTTTACAAATCCTTTCAGGACAGAAAGTGATAGAGATGGATCTTGATGCAAGAGACCAGCTGACCAGAAAGGCTCGAGATGTAAGTATGGGAAAGCGTCCGCTGAGAGATTTTGAGGACCCGAGGCTAGGAGGCGAGGTTAACAAGGCGAACTTCGAATCTATATTGCACATAGCGGTTCTGTGTGTTGCAAAACACGGCAAGAGTCGTCCAACCATTGAAGTTATCTTTGACGAGCTCGACGCCGTCTATAAGGACACCTGTTTACGCATCTCCGCCGCAAAGCAAGACAATAATAAGCGCCCGCCATCTTCGTCAACTCCATCCACCAGCTCAAGCTCCAAGTCCCCCAAACAGATCTCTGTTTGA 1824 0.4622 MDMKTIFHSTGVSVFAFLIFLSVFLDSSLIVSTAPNDLPQVECALNFTTYPLVASFGECWNVQENISSWTADGFPATMCCRNALTALSEALALHNHSLHGPLFVSPRQWQNCSTLFYSQYKMPAHSCGFDALFMDKEIYHCSNLAMQDVASMPQYQDTLNQCSHFDQPFVEACPDCTTAILSLRDALNGGNGDGADRAVCGVAALVAVMGGKQNDPSLADKFLRCLPPISVKKSKYSASLVLISVPVVVVVLLLIALLVKYTHKKKKQPLRPFQLKEITSWAGLYCFTKQEIEKAMNYGDEKICLGRGSAGQVYRGVLPSGQLVAIKHLTKSSPSDSFTREIQGLSRLRHPNLVCLFGCCIEGDEKYLVYEFCANGNLAQHLLKKDCHLNWETRVKILRDCSYALKYLHHHIEGCVVHRDIKLTNILLTEEYQAKLSDFGLARMMGVEESKVFTDIRGTIGYMDPEYMSNAKLTCASDVYSFGIVALQILSGQKVIEMDLDARDQLTRKARDVSMGKRPLRDFEDPRLGGEVNKANFESILHIAVLCVAKHGKSRPTIEVIFDELDAVYKDTCLRISAAKQDNNKRPPSSSTPSTSSSSKSPKQISV* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0005 607 Pfam SPARK 40 192 IPR043891 -
Amo16g0005 607 Gene3D Transferase(Phosphotransferase) domain 1 373 589 - -
Amo16g0005 607 ProSitePatterns Serine/Threonine protein kinases active-site signature. 416 428 IPR008271 GO:0004672|GO:0006468
Amo16g0005 607 SMART serkin_6 299 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo16g0005 607 PANTHER OS01G0253100 PROTEIN 54 576 IPR045271 GO:0004714|GO:0006468
Amo16g0005 607 Gene3D Phosphorylase Kinase; domain 1 259 372 - -
Amo16g0005 607 ProSiteProfiles Protein kinase domain profile. 299 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo16g0005 607 MobiDBLite consensus disorder prediction 579 607 - -
Amo16g0005 607 SUPERFAMILY Protein kinase-like (PK-like) 280 564 IPR011009 -
Amo16g0005 607 Pfam Protein kinase domain 305 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo16g0005 607 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 40 54 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0005 Amo-Chr16 180283 182759 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0005 232 565 Receptor kinase-like Gene Family AT2G19230 35.882 7.07e-57 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Amo16g0005 Pkinase 5.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0005 - - gmx:100807158 708.368