Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1885 ATGGAAAAAAGCACCAAAGAAGACTTAGAAATCAAGAAGGGGATTGTGATGCATCGGAGATTCGAGTATGTTAGTTATGGTGGCGAGCACCACCTCCCCCTGATCATGAACCTAGTCGACCAAGAACTCAGCGAGCCTTACTCTATATTCACGTATCGTTACTTTGTCTATCTCTGGCCTCAGCTCTCTTTCCTAGCATTCCACAAGGGTAAATGTGTCGGCACGGTGGTTTGTAAGATGGGCGACCATCGAAACATTTCCAGAGGATACATTGCCATGTTGGTTGTGATAAAGCCCTATAGAGGAAAAGGCATTGCTACAGAACTTGTTACTAGATCTATTAAGGTGATGATGGAATCTGGTTGTGAAGAAGTTACTCTGGAATCAGAAGTTACAAACAAAGGAGCATTGGCACTCTATGGTCGCCTTGGCTTTATTAGGGCTAAGAGGCTCTTTCATTATTATTTGAACGGAGTCGATGCTTTCCGGCTCAAACTGCGATTCCCTCGGCCGGAGCTGCACCCATCTCTGCCTGTGATGGCAGATAAATATGGTACTAGTCATATAACAAGTGATCATGGTAATTCAGCATTTGAACAATGA 603 0.4411 MEKSTKEDLEIKKGIVMHRRFEYVSYGGEHHLPLIMNLVDQELSEPYSIFTYRYFVYLWPQLSFLAFHKGKCVGTVVCKMGDHRNISRGYIAMLVVIKPYRGKGIATELVTRSIKVMMESGCEEVTLESEVTNKGALALYGRLGFIRAKRLFHYYLNGVDAFRLKLRFPRPELHPSLPVMADKYGTSHITSDHGNSAFEQ* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1885 200 PANTHER N-ALPHA-ACETYLTRANSFERASE 30 11 168 IPR044542 GO:0004596|GO:0017196
Amo15g1885 200 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 16 169 IPR000182 GO:0016407
Amo15g1885 200 Pfam Acetyltransferase (GNAT) family 56 145 IPR000182 GO:0016407
Amo15g1885 200 Gene3D - 28 180 - -
Amo15g1885 200 CDD NAT_SF 63 128 - -
Amo15g1885 200 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 29 170 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1885 Amo-Chr15 120852997 120853599 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Amo15g1885 Acetyltransf_1 4.4e-16 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1885 K00670 - gmx:100806790 334.724