Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1879 GCCTCCTGGGATTCTCCCAAACTCACTCGATCATGCTCAAACCTGGAAAGAAGGGATGTTCTCGGTAATACAATTCATCAATTCCCAGATTCAAAGTCGCAATCTTTCGAGAATTTACAGGAACTTACAGCAGGTAAAGTGGCTGCTAATCTTGAAAGCCCCAGGTCTGTGATGACTCACTGCAGTGCTGATAGAGTTATGTTGAGAAGGCATTCCTCAAGCCAAGTTCTTCCTTCTGGAAGTAAGAGATTCTGGTGGAAGATGTTTGTCTGGAGCCATAGGAACATACATAGACCTATTTCAAGCAAATCAACACAGGTGAATCCTGGTGTGGCTGTAACGCACAATCCATACGGATACTCTTCCGACACCCTTGAACCGAAGCACAAGCAGTCACCAGGAAATGTGGAATGGCTCTTCAGCTATAATATAGAATCCTTGAGACTTGAATGTTTTATCAAATGCAAGGGTGTTCTAAGAGGCAGCGCAGAGGTGGCAGTGAAGCGAATATCACAAGAGAATGACGGCGTGAGAGAGTTCCTAGCAGAAATTTCAAGCCTTGGAAGATTGAAGCAGAGAAACTTGGTTGCTCTGAGAGGATGGTGCAAGAAAGACATGGGAAATTTCTTGTTAGTTTATGAATACATGGATAAAAGAGTGTTTTGTGATGAGAGCATGATGCTGAACTGTGAAGAGAGAATAAGAATCATCAAAGGTGTGGCCTTTGCTGTGTTGTATTTGCATGAAGGTTGGGAAGAACAAGTTCTGCATAGGGACATCAAAGCCAGCAATGTGTTACTTGATAAGGATATGAATGGAAAGCTTGGAGACTTTGGATTAGCAAGAATGAATAGCCATGGCCAAGTTGCTAGCACAACAAAGTACCCAAGGGATGGGAAGCTCTTTGTTTCTGTTGTTTCGGTAGAAAGTGGTAAAGCTATTGCAAAGTCAAGCAAGGTGCTGTTGCAAAATGGGAGTTGTCAGTGGTCAGATAAACACATTGAAATTATAAACACATAA 1020 0.4255 ASWDSPKLTRSCSNLERRDVLGNTIHQFPDSKSQSFENLQELTAGKVAANLESPRSVMTHCSADRVMLRRHSSSQVLPSGSKRFWWKMFVWSHRNIHRPISSKSTQVNPGVAVTHNPYGYSSDTLEPKHKQSPGNVEWLFSYNIESLRLECFIKCKGVLRGSAEVAVKRISQENDGVREFLAEISSLGRLKQRNLVALRGWCKKDMGNFLLVYEYMDKRVFCDESMMLNCEERIRIIKGVAFAVLYLHEGWEEQVLHRDIKASNVLLDKDMNGKLGDFGLARMNSHGQVASTTKYPRDGKLFVSVVSVESGKAIAKSSKVLLQNGSCQWSDKHIEIINT* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1879 339 Gene3D Phosphorylase Kinase; domain 1 154 215 - -
Amo15g1879 339 Pfam Protein kinase domain 162 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo15g1879 339 ProSiteProfiles Protein kinase domain profile. 125 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo15g1879 339 PANTHER - 156 294 - -
Amo15g1879 339 SUPERFAMILY Protein kinase-like (PK-like) 156 290 IPR011009 -
Amo15g1879 339 ProSitePatterns Serine/Threonine protein kinases active-site signature. 255 267 IPR008271 GO:0004672|GO:0006468
Amo15g1879 339 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VII.1 156 294 - -
Amo15g1879 339 Gene3D Transferase(Phosphotransferase) domain 1 216 303 - -
Amo15g1879 339 SMART serkin_6 147 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1879 Amo-Chr15 120650348 120653078 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1879 156 294 Receptor kinase-like Gene Family AT4G04960 64.865 3.53e-55 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Amo15g1879 Pkinase 3.1e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1879 - - ahf:112762724 573.548