Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1840 ATAAGGGAACTGGGCCCATTGACATCAGATGCATTTGAGACGTACAAAAGGAGGAATATCAAAGAATTGCATAAAGCGTTGCACAGGTGCAATGATCAACTGCAGCAGTTCAGTCATGTAAACAAGAAAGCGCTTGACCAGTATATAAATTTGACAGAACAACGAGAGGAACTTCAGAAAAGGCAAGCTGAACTTGATGCAGGAGATGAGAAAATTAGAGAGCTAATATCTGTACTTGATCAACGGAAGGATGAATCAATAGAGCGCACTTTCAAAGGTGTTGCTTGGCATTTTCAAAAAGTGTTTTCTGAACTCGTACCGGGGGGTCATGGTCTTCTGTTTATGATGAAGAAGAAGGAGGGTGGTCACGATGATGATGAGGATGATGAGGTTGGTCCTCGTGAAGCAAACCCAGAGGGTAGAGTAGAAAAGTACATTGGAGTGGAAGTGAAGGTTTCTTTTACTGGACAAGGAAAGACACAGTCCATGAAGCAGTTGTCTGGGGGTCAAAAGACTGTAGTTGCTCTTACACTTATCTTTGCCATACAACGATGTGATCCTGCTCCGTTTTATCTATTTGATGAGATTGATGCGGCTCTGGATCCACGATACAGAACTGCTGTTGGAAATATGATCCGCTGTCTGGCAGACTTTTCAACCACACAATTTATCACAACAACATTCCGCCCAGAGCTTGTGACAGTTGCTGACAAGATCTATGAAGTAACGCATAAAAGCCGGGTTAGCCGTGTTAATGTTGTATCCAAGGACGATGCTAGATTGTTTCAAAAATTAAAAACCAATGAGCGGTTTATACTATAG 822 0.4221 IRELGPLTSDAFETYKRRNIKELHKALHRCNDQLQQFSHVNKKALDQYINLTEQREELQKRQAELDAGDEKIRELISVLDQRKDESIERTFKGVAWHFQKVFSELVPGGHGLLFMMKKKEGGHDDDEDDEVGPREANPEGRVEKYIGVEVKVSFTGQGKTQSMKQLSGGQKTVVALTLIFAIQRCDPAPFYLFDEIDAALDPRYRTAVGNMIRCLADFSTTQFITTTFRPELVTVADKIYEVTHKSRVSRVNVVSKDDARLFQKLKTNERFIL* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1840 273 Coils Coil 41 71 - -
Amo15g1840 273 Pfam RecF/RecN/SMC N terminal domain 26 246 IPR003395 -
Amo15g1840 273 Gene3D - 53 262 IPR027417 -
Amo15g1840 273 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 2 262 - -
Amo15g1840 273 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 18 258 IPR027417 -
Amo15g1840 273 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3 2 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1840 Amo-Chr15 120124058 120126888 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1840 147 232 Structural Maintenance of Chromosomes family AT5G15920 29.670 1.99e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1840 K06669 - gmx:100810448 434.106