Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1825 ATGAAAAAATCAGGAGGAGGAGCCATCATGAAGGGTTACGAGCCACGTTCAAGTTCTTCTTGTGCCGCCTGCAAATTCTTGAAGAGAAGGTGCATCCCTAACTGCATATTCGCCCCTTACTTTCGCTCCGACGAGTGCAAGAAATTCGCCAAAGTTCACAAGGTCTTCGGTGCCAGCAATGTCAGCAAGATCCTCGTCGAGGTCCCCGAGGACCAGCGGGAAGACACCGTCAACTCCCTCGCCTACGAGGCCGAGGCCCGCCTCCGCGACCCTGTTTACGGCTGCATTGGCGCCATTGCTCTCCTCCAGAGGAAAATGCTCGAGCTTCAGCACGATCTCGCCATTGCCAAGGATCGTCTTGCTCGCTATTCTGCTGTTGCTGCTACTGCTACTGCTGATGCTACTTCTCTTATTACTTCTTCCTCTTCTTCCTCCGATAACATCTTTCATTTCAATCATTCTCAAGTTTCCTTGCCTCCTTTCCCTGAATTCCCTTCTTCCTCTGATTTCAATGACACTGCTGCTTTCTGCCACGCCTCTTCTTCTTCCTCTCAATCCTTTCCCACCACTGTAGTCGACGATTTCATTCAAATTCCATATATATTTTAG 609 0.4975 MKKSGGGAIMKGYEPRSSSSCAACKFLKRRCIPNCIFAPYFRSDECKKFAKVHKVFGASNVSKILVEVPEDQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMLELQHDLAIAKDRLARYSAVAATATADATSLITSSSSSSDNIFHFNHSQVSLPPFPEFPSSSDFNDTAAFCHASSSSSQSFPTTVVDDFIQIPYIF* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1825 202 PANTHER LOB DOMAIN-CONTAINING PROTEIN 21 10 148 - -
Amo15g1825 202 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 10 148 - -
Amo15g1825 202 ProSiteProfiles LOB domain profile. 19 120 IPR004883 -
Amo15g1825 202 Pfam Lateral organ boundaries (LOB) domain 20 117 IPR004883 -
Amo15g1825 202 Coils Coil 99 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1825 Amo-Chr15 119914838 119915521 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1825 10 126 AS2 family AT3G11090 77.778 4.09e-65 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Amo15g1825 LOB 1.3e-37 No_clan