Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1814 CCAATTTCTTTCCCCCTGTTTACTTACCAGTTGCCGTCAGCTACTCTACTCTCTGCTGGTCTTAGCATTCACCGTCGCCGTCCAGCCAAGCCGTCGCCGTTGCCGTCCAATCCATCTAATAACGTCGTTCGTAGGCTCTCCCTCCCCGTCTCCTCTTCTCTCTTCTCTCTTCTCTTTTCTCTCGTCGAGTGGTTGTCAGCGCTGTGGTGTTCCATTCTCCCTGCATCCTCCACTTCCATAGTAACAATGGAGCCTCAGACTCAGGAAGCATCAAATAGTCAAAGACACACAAGTGATCAAAATGTGCATAATGTTAGTGATCATGTGGATGAAGATGCAACTTCAGATGCGGTGGATATGGATCAATATCGCATAAACTCTTGGGAAGATATTGGTAAGATTGATTTCTCAAGTCTATGTATGGAAAATATTTGTCAATTGCACTTTGCTGATCTTGGCTTGGCATTCGAATTTTATAATTCATATGCCAAGACGAGGGGCTTTAGTGTGCGAAAGAGTAGAAGTAKAATAGTTGATGGAAAAGTTAGAGAAAAAACATATGTTTGTTCTTGTGAAGGGTATAGATTAGAAAAATGGAACCATATGAAAAATCGAGTTAGGGAGCCAAAACCAGAGACAAGATGTGGTTGTATGAGTAAACTTCATGTAGTGAGAGATTTTTGTGATGAACACAACCATGAGCTTGTTGTTCCAAAGTTAGCAAGAATGTTAAGATCTCACAAGAAAATGACTGAGCCTGACATTAGTCAAATGAACCATATGAAAGAGGTGAGGATCAGCATGCCAAACATATTTGGGTCATTAGCTAGCATTAGTGGGTATGATGACATGGGTGGCTTGATGGAGGATTCGTTGGATATCAGTCGGCGTGCATGTTTGGCACATTGGTGTAAACAAATTATGAACGAAGGGTGCCTAAAAGGGGATCTTTTTAATGAATCACAAGATGCATTGGTAAATATACTTTCATGTATTAGGGCTCATAGTGGGGACAATAACATGATGGAGGGGCATGCAGAATACATGTATGAAGACCTTGTAAAGAATGGAAGTACTGAGATAGAGACCACAAGGAAGCCTAAGCATTGCAGCTACTGTCGCAAAGGAGGTCATAACATTGTTACATGTTCCATGAGGAAAATGGATGAAAGGACTCCCCAATTTGATGATGACGCTGAGGAGAATATTGAGGGTGAAGACTACTCCTTCGTAGATGCTGAAAGTGATGAGTATGTTCACACTGAATGGTTTGAGGAGGAAGATGTAAGAATATTAGATTCCTCAAGGTATTATGAACAGAGTGGTGGCGAGACTGACTCAATGGATTACGATTCTGGTGGGGCAAACGATGATGATGAGGCAGAGTTGTGA 1392 0.4195 PISFPLFTYQLPSATLLSAGLSIHRRRPAKPSPLPSNPSNNVVRRLSLPVSSSLFSLLFSLVEWLSALWCSILPASSTSIVTMEPQTQEASNSQRHTSDQNVHNVSDHVDEDATSDAVDMDQYRINSWEDIGKIDFSSLCMENICQLHFADLGLAFEFYNSYAKTRGFSVRKSRSXIVDGKVREKTYVCSCEGYRLEKWNHMKNRVREPKPETRCGCMSKLHVVRDFCDEHNHELVVPKLARMLRSHKKMTEPDISQMNHMKEVRISMPNIFGSLASISGYDDMGGLMEDSLDISRRACLAHWCKQIMNEGCLKGDLFNESQDALVNILSCIRAHSGDNNMMEGHAEYMYEDLVKNGSTEIETTRKPKHCSYCRKGGHNIVTCSMRKMDERTPQFDDDAEENIEGEDYSFVDAESDEYVHTEWFEEEDVRILDSSRYYEQSGGETDSMDYDSGGANDDDEAEL* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1814 463 MobiDBLite consensus disorder prediction 84 100 - -
Amo15g1814 463 MobiDBLite consensus disorder prediction 84 113 - -
Amo15g1814 463 MobiDBLite consensus disorder prediction 434 463 - -
Amo15g1814 463 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 98 259 - -
Amo15g1814 463 Pfam FAR1 DNA-binding domain 157 236 IPR004330 -
Amo15g1814 463 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 98 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1814 Amo-Chr15 119533929 119538649 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo15g1814 FAR1 6.6e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1814 - - ahf:112719698 385.956