Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1788 ATGACATTTAAAGAACATGAGGAACAAGTAACTTATGCTTCTAGACTTCCATTGGCTTTGGAAGTTATAGGTTCTAACTTGTTGGGAAAAGATTTAGAACAGTGGGAATCTGTAATGGATCAATATGAAAAAGTTAGTTTTGATGCTTTGGAAGAAGTTGAGCAGAGTGTTTTTCTTGATATTTCTTGTTATTTTAAAAGACATAATTCAATGAAAGTTACTGCTGTACTTCAAGCTCATTATGACAGGGGTATAAAATATCATATTGGAATGTTGGTTGAAAAATCTCTCACAAAGATTGATCAATTAAGAATAACATTACACGATCTAATAGAGAACATGGACAAAGATATATGTCGAGAAAAATCGTCAAAAGTGGCTAGAAAATATAGTAGATTATATTTCTACAAAGACATATTTAAAGAAGGAGGTGAAAACCCATCGAAAAATGATGATGTAGAAGTAAAATGGGATGAAACAAATTTCAAAGAGATGAAAAATTTCAAAACATTTATCATAAAAAATAAAAAGCTTTCCATGCTCAAGTTGCCTGATTATCTCCACATGTTACCCAAGTTGGATAGCTTATCCAAGTCTCAGCTCACAATTCAACTGAAGAATGAAATGTATAGAATACCAAGTGTAATTGGCATGATGCCATGCGTGTCTTTTTGTGATATTAAATTAGGAGAAAATAAGGGGAGGGTATCAGGAGAGCAGGAAGAGAGGCTTCATGGAATACTCACTCACTCCTTCCCCTCTTCACATATGATAAGTCTTTTTCTCACAAACAGCGAATTGTCAGATGACTTTTTTCACTAG 822 0.3321 MTFKEHEEQVTYASRLPLALEVIGSNLLGKDLEQWESVMDQYEKVSFDALEEVEQSVFLDISCYFKRHNSMKVTAVLQAHYDRGIKYHIGMLVEKSLTKIDQLRITLHDLIENMDKDICREKSSKVARKYSRLYFYKDIFKEGGENPSKNDDVEVKWDETNFKEMKNFKTFIIKNKKLSMLKLPDYLHMLPKLDSLSKSQLTIQLKNEMYRIPSVIGMMPCVSFCDIKLGENKGRVSGEQEERLHGILTHSFPSSHMISLFLTNSELSDDFFH* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1788 273 Gene3D - 3 67 IPR042197 -
Amo15g1788 273 SUPERFAMILY "Winged helix" DNA-binding domain 44 140 IPR036390 -
Amo15g1788 273 PANTHER ARCHAEAL ATPASE 8 219 - -
Amo15g1788 273 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 219 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1788 Amo-Chr15 118987226 118988919 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1788 10 134 WRKY Transcription Factor Family AT5G45050 32.374 4.51e-13 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1788 - - aip:107644586 247.669