Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1771 ATGAAACAAAGAACACTCTTACCCACCTTCAGTTCCTTTTATTCTTTTCCCCTTGTTATTCGCTCGTACATAATAATCTTCTTCCTTCTTCTAACAAGAATCACTCTGTGTTCTGTGAATCCAAAGTTCCAAGCATGTGAGCCCAAAACTTGTGGTGGTGATACTAATCATCAAAACATAAGCTTTCCCTTCTACATCATATCAAAACAAAACTCCTACTGTGGTGTCCCTGATTTCGGTCTCACCTGCTCTCACGATGGCTTCCCAATCGTCAATATATCAGGAGCTCTATACACTGTCCAAAACATTTTCTACAACAACCAATCACTTCGAGTGTCTATCCCTGCGCTCTCGGGGTTAAGAACCACGGAATGTATTGCCCCACTGAGAAACTTCACCGGCCACAGCAAAAGGTTCATTGTTGCTTCCAAGCAGAAGCAAGTGTTGCTGTTTTATGGCTGTGAAAACATGCAAGAGCATAGTATTGGGTGTTCAGCTGAAAACAGAACGAGATCGGTTGTGGCGCTTTATGGGGATGACGTTGAGAATTTGAAGTTGGCGACGAAGAATTACAGGGGGACGGTGAGCGTAACGAGGGTGGAAGATGAGAAAGGAGGGGTTGAAGAGGCGCTGAGAAGAGGGTTTTTGATGAATTGGACGGCCAAAAATTGCAGCGAGTGCTCGAGCAGTGGTGGAAGGTGTGGGTTCGATGAAGAAGAATATACTTTCAGGTGCTATTGTCCTGATAGAATTGATTCAGAGAGCTGTTATTCACAACCAGGTAATGGCTGGACCCGGCAAAAGAAGGTCATTATTGGTGCTACAGCAGCTGCAGTAATTGCAGGATTGTTGAGTATTTGTTATTTTATCTACATGTTACCAAGATGGCGAGAAAAATACTGCTTTCCAACAAAGGGTAACCAAGATATTGAAACTTTTTTAAAAGATCATGGAGTGTTAACTATAAAAAGATATAAATTTTCTGATGTGAAGAAAATGACCAACTCCTTCAAAGTTAAACTAGGACAAGGTGGTTTTGGTGTTGTATACAAGGGAAAGTTATCCGATGGTTCTAATGTGGCAGTCAAAATGTTGAATCCATCCAAAGGAAATGGTAAAGAGTTTATCAATGAGGTAGCTAGCATTAGTAGAACTTCTCATGTTAATGTTGTCACCCTTTTTGGATTCTGCTTTGAAGGTCGCAAGAAAGTTCTTATTTATGAATTTATATCAAATGGTTCCCTTGACAAGTTTATTTACAGAAAAGAAGGAGTTGAAACTACTACATTGTTGAGTTGGGATAAGCTGTATCAAATTGCCAAAGGGATAGCTAGGGGGTTAGAGTACTTACATAGAGGATGCAACACTCAAATTTTACATTTTGACATAAAGCCACATAATATTCTTTTGGATGAAAATTTTTGTCCTAAGATATCAGATTTTGGACTAGCAAAACTTTGTCCAGGGAAGGAAAGTCTTATTTCCATGTCGGATGCTAGAGGAACAATTGGGTATATAGCTCCAGAAGTTTGGAGTAGACATTTCGGCAAAGCTTCTAATAAATCTGATGTTTATAGTTACGGAATGATGCTTCTTGATATAGTGGGAGGAAAGAAGAACATTAATGTAGAAGGGAGTCAAACAAGTGAGATATATTTTCCTGATTGGATATACAAAAAGCTTGAGCAAGGCACTCAATTAGGACCTGAAGATGGAGTGGTGGCAATAGAGGAAAATGAATTGGTTAAGAAAATGACGATTGTGGGTTTATGGTGTATTCAAACAGTTCCAAATGATAGACCTACAATGAGCAAAGTTGTAGAAATGTTAGAAGGCAGCATAGATTCCATAAAAATGCCACCAAGACCTGCTCTGTCTTCTCCTGTAAGATCAATTTCAGAATCTTCTACTTTGTTAAATTAG 1923 0.3926 MKQRTLLPTFSSFYSFPLVIRSYIIIFFLLLTRITLCSVNPKFQACEPKTCGGDTNHQNISFPFYIISKQNSYCGVPDFGLTCSHDGFPIVNISGALYTVQNIFYNNQSLRVSIPALSGLRTTECIAPLRNFTGHSKRFIVASKQKQVLLFYGCENMQEHSIGCSAENRTRSVVALYGDDVENLKLATKNYRGTVSVTRVEDEKGGVEEALRRGFLMNWTAKNCSECSSSGGRCGFDEEEYTFRCYCPDRIDSESCYSQPGNGWTRQKKVIIGATAAAVIAGLLSICYFIYMLPRWREKYCFPTKGNQDIETFLKDHGVLTIKRYKFSDVKKMTNSFKVKLGQGGFGVVYKGKLSDGSNVAVKMLNPSKGNGKEFINEVASISRTSHVNVVTLFGFCFEGRKKVLIYEFISNGSLDKFIYRKEGVETTTLLSWDKLYQIAKGIARGLEYLHRGCNTQILHFDIKPHNILLDENFCPKISDFGLAKLCPGKESLISMSDARGTIGYIAPEVWSRHFGKASNKSDVYSYGMMLLDIVGGKKNINVEGSQTSEIYFPDWIYKKLEQGTQLGPEDGVVAIEENELVKKMTIVGLWCIQTVPNDRPTMSKVVEMLEGSIDSIKMPPRPALSSPVRSISESSTLLN* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1771 640 MobiDBLite consensus disorder prediction 619 640 - -
Amo15g1771 640 ProSiteProfiles Protein kinase domain profile. 335 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo15g1771 640 Pfam Wall-associated receptor kinase C-terminal 199 249 IPR032872 -
Amo15g1771 640 Gene3D Phosphorylase Kinase; domain 1 310 409 - -
Amo15g1771 640 ProSitePatterns Protein kinases ATP-binding region signature. 341 363 IPR017441 GO:0005524
Amo15g1771 640 SMART serkin_6 335 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo15g1771 640 PANTHER RUST RESISTANCE KINASE LR10-RELATED 33 637 IPR045874 GO:0004672
Amo15g1771 640 Pfam Wall-associated receptor kinase galacturonan-binding 46 113 IPR025287 GO:0030247
Amo15g1771 640 CDD STKc_IRAK 341 612 - -
Amo15g1771 640 Gene3D Transferase(Phosphotransferase) domain 1 410 624 - -
Amo15g1771 640 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Amo15g1771 640 Pfam Protein kinase domain 338 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo15g1771 640 SUPERFAMILY Protein kinase-like (PK-like) 319 611 IPR011009 -
Amo15g1771 640 PANTHER - 33 637 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1771 Amo-Chr15 118435402 118444624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1771 22 638 Receptor kinase-like Gene Family AT1G66910 39.150 1.57e-138 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Amo15g1771 Pkinase 3.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1771 - - adu:107490347 1150.19