Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1766 ATGCGATATCGACAAGGTAATCAAGATATTGAAACTTTCTTAAAAAATCATGGTGCGTTAACTATAAAAGGATATAAATTCTCTGATGTGAAGAAACTGACAAACTCTTTCAAAGTTAAACTAGGACAAAGTGGTTTTGGTGTTGTATACAAGGGAAAGTTATCTGATGGTTTTAATGTGGCAGTCAAAATGTTGAATCCATTCAAAGAAAATGGTAAAAAATTTATCAATGAGGAAGCTAGCATTAGTAGAACTTCTCATATTAATGTTGTCACCCTTTTTGGATTTTGCTTTGAAGTCCGCAAGAAAGTTCTTATTTATGAATTTATATTAAATGGTTCCCTTGAAAAATTTATTTACAGAAAGGAAGGAGTTGAAACTACTACATTGTTAAGTTGGGATAAGCTGTATCAAATTGCCAATCAAGGGATACTACATAATATTCTTTTGGATGAAAATTTTTGTTCTGAAATATCAGATTTTGGACTAGCAAAACTTTATGCTGGGAACGAAAGTCTTATTTCCATGTCAGATGCTAGAGGAACAATAGGGTATATAGCTCCAGAAGTGTGGAATAGACATTTCGGCAACCCTTATCATAAATCTGACGTTTATAGTTACGGAATGATGCTTCTTGATATTGTGGGAGAAAAGAAGAACATTAATGTAGAAGGGAGTCAAACAAGTGAGATATATTTCCCTGATTGGATATGCAAAAGGCTTGAGCAAGGAACTCAATTAGGGCCTAAAGATGGAGAGGTGGCGATAAAGGAAAATGAATTCGTTAAGAAAATGATGATTGTTGGTTTATGGTGTATTCAAACTTGA 828 0.3333 MRYRQGNQDIETFLKNHGALTIKGYKFSDVKKLTNSFKVKLGQSGFGVVYKGKLSDGFNVAVKMLNPFKENGKKFINEEASISRTSHINVVTLFGFCFEVRKKVLIYEFILNGSLEKFIYRKEGVETTTLLSWDKLYQIANQGILHNILLDENFCSEISDFGLAKLYAGNESLISMSDARGTIGYIAPEVWNRHFGNPYHKSDVYSYGMMLLDIVGEKKNINVEGSQTSEIYFPDWICKRLEQGTQLGPKDGEVAIKENEFVKKMMIVGLWCIQT* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1766 275 ProSiteProfiles Protein kinase domain profile. 35 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo15g1766 275 Gene3D Phosphorylase Kinase; domain 1 3 109 - -
Amo15g1766 275 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 6 141 - -
Amo15g1766 275 Gene3D Transferase(Phosphotransferase) domain 1 111 275 - -
Amo15g1766 275 PANTHER RUST RESISTANCE KINASE LR10-RELATED 146 275 IPR045874 GO:0004672
Amo15g1766 275 PANTHER RUST RESISTANCE KINASE LR10-RELATED 6 141 IPR045874 GO:0004672
Amo15g1766 275 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 146 275 - -
Amo15g1766 275 SUPERFAMILY Protein kinase-like (PK-like) 21 224 IPR011009 -
Amo15g1766 275 Pfam Protein tyrosine and serine/threonine kinase 38 217 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1766 Amo-Chr15 118364654 118366186 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1766 18 274 Receptor kinase-like Gene Family AT5G38260 47.464 3.65e-78 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Amo15g1766 PK_Tyr_Ser-Thr 1.2e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1766 - - ahf:112751085 372.859