Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1762 ATGATTGATGCTGCCAAGGAAAATCCTCACTTAGCTCAAAAACTACATGATGTTTTACTTGAAAGTGATGTCATTGCTCCTCCAAATTTATTTTCTGAAATTTATCACGTGTTATGCTCCCCAACTGAAGAAAAAGATGAACACAAACCAGAAGGTGGACAAGAGACTCAGGTTGACGAGAATCTCGGTCCTACTTTGCCTCACCACAGAGTTCATCCGAAAGGAAGTTCAAGCAGCCAGCTGGAGCACTCTAAGCCTGTTGAAGGTTTAGGAATAAACCTTCTTCTTGATCCGAAGTTAGCAGCTGTACAACATACACCATCCCAGGTAACATATGGGAAAAATGTTCCAGTTGCGGCAGCTGCACCAGCAGCTGCTGCTGTTGTTGCTTCCTCTATGGTAGCTGCTGTAGCAAAGTCAAACACTGACTCAAACATTGAGCTTCCAGTAGCTGCAGCGGCCACTGCAACTGCTGCAGCTGTAGTAGCAACCACTGCATCTGTCAGCAAACTGTATGAGCAAGGCAGTCGAAGTGAGGGACACATGGATGGCACTGGTTATGAGCCGAAGGGTAGTGGTGATGGTGAGAATATTGTGGTAGGAGCGAATTCAGAAGGTGATAGAATATCTGATAGATCTATAGTAAGCAATGACAGTACAAAATCTGATTTTACATTTGATGATGTTGCCGAGTATGACATTCCGTTGGAGGAAATCACACTGGGTGAACGTATCGGACTTGGATCGTATGGGGAGGTATACCGTGGTGAATGGCGTGGAACAGAAGTTGCTGTAAAAAGATTTCTTGATGAAGATATATCTGGTGAATCACTTGAAGAATTCATAAGTCAGGTTCAAATAATGAAAAGACTGAGGCATCCAAATGTTGTTCTCTTCATGGGAGCAGTTACTCGACGTCCGAATCTTTCTATTGGCCTGAGGAATGAGCTATTTGCACAACTGCACTCCAGTGATTGTACACCGTTGGATTATGAAGATGCCAACTAA 1008 0.4375 MIDAAKENPHLAQKLHDVLLESDVIAPPNLFSEIYHVLCSPTEEKDEHKPEGGQETQVDENLGPTLPHHRVHPKGSSSSQLEHSKPVEGLGINLLLDPKLAAVQHTPSQVTYGKNVPVAAAAPAAAAVVASSMVAAVAKSNTDSNIELPVAAAATATAAAVVATTASVSKLYEQGSRSEGHMDGTGYEPKGSGDGENIVVGANSEGDRISDRSIVSNDSTKSDFTFDDVAEYDIPLEEITLGERIGLGSYGEVYRGEWRGTEVAVKRFLDEDISGESLEEFISQVQIMKRLRHPNVVLFMGAVTRRPNLSIGLRNELFAQLHSSDCTPLDYEDAN* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1762 335 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 1 313 - -
Amo15g1762 335 ProSitePatterns Protein kinases ATP-binding region signature. 245 266 IPR017441 GO:0005524
Amo15g1762 335 SUPERFAMILY Protein kinase-like (PK-like) 218 311 IPR011009 -
Amo15g1762 335 MobiDBLite consensus disorder prediction 174 195 - -
Amo15g1762 335 Pfam Protein tyrosine and serine/threonine kinase 239 309 IPR001245 GO:0004672|GO:0006468
Amo15g1762 335 Gene3D Phosphorylase Kinase; domain 1 232 313 - -
Amo15g1762 335 ProSiteProfiles Protein kinase domain profile. 239 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo15g1762 335 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 313 - -
Amo15g1762 335 MobiDBLite consensus disorder prediction 42 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1762 Amo-Chr15 118171664 118174984 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1762 1 322 MAP Kinase Kinase Kinase AT1G73660 52.367 9.45e-70 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Amo15g1762 PK_Tyr_Ser-Thr 2.4e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1762 - - aip:107641216 535.413