Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1761 ATGTTGCGTGCAGCATCATTCTCCAGGTTCAGCTTCTCTCTTCATATCCCCTCTTTTCTTGTGCCCTATGTTTTCCCTTTTCGCTTTCCTTCCCGTTCATGTTCAATGTCAAGCCTTCACTCTCATTCTGAGCTCACATCCCCTCGCCATGTTGATGAAGCTGTTGATTCCTTCACTCGCATGCTCTCTATGCGTCGCACTCCATCCATTATCCAATTTAACCAGATTTTGGGGTCCCTTGCCAAGACGCACCATTTCCCAACCACCATTTCCCTTTTTCAGCAATTGCAAACCAGGGGAATTGCGCCCAGCATAGTTACTATGAATATTTTAATCAATTGTTGCTGCGGCATGGGTCGGATCACTCTCGCTTTCTCTATATTGGCCAAGATTTTCAGGATGGGTTTTCAGCCAAATACCATAACATTGAATACACTCATTAAAGGTCTCTGTCTCTGTGGTAATGTTGAAAAAGCACTGCACTTTCACGACAGAGTGCTGGCTCATGGATTTCACTTCGACCAAGTCACTTATGCAACTTTGATAAATGGGCTCGGTAAGACCGGACACACAGCAGCTGCTATTCAAGTGTTGAAAAAGATCCCACGGTATGGCACTGTTCCTAATGTCGTCATCTACAACACAATTATTGATAGCCTCTGCAAGGATACACTTGTAAGTGAGGCTTTTCATTTCTATTCTGAAATGCTTGCTAAGGGAATTTCTCCTAATGTTATCACCTATACCACTCTAATTTTTGGATTGTGCCTTGTGGGTCAACTTAAGGAAGCCATTGATTTACTAAATCATATGATGCTGAAAAACATTACTCCAGATGTTCGTACCTATAATACTTTGATTGATGGACTATGTAAGGAGGGAAATATCAAAGATGCTAAGAGTGTGTTGGCTGTGATGACAAAAGATGCTGTGGAACCAACTGTGGTTACTTATAATTGTTTAATGGATGGGTATTGCTTGGTTAACGAATTAAACAAGGCAAAATGTATATTCGACACAATGGCCCGGATAGGAATGGCTCCTAATATCCGAAGTTACAATATTATTATTAATGGCTTGTGCAAAAGTAAATTGATGGATGATGCCTTGAATCTCTTTGAAGAGATGCGTCGCAAGAACTTGGTTCCTAACACGGTAACTTACAATACTCTAATTGATGGTTTGGGAAAATCAGGGAGAATCTCTTGTGCTTCAAAGCTTCTTGTTGAGATGCATAATAAAGGTCAACCTGCTGATATAATCACTTACAATTCCTTGTTGGATGCGATGTTCAATATCAAACAACTTGACAAGGCACTTATGTTATTTATTCAGATGAAAGAGAGTGGCATTGATCCAAATATATGCACGTATAGTATACTTATTGATGGCCTATGTAAAAGTGGAAGACTTATAGATGCAAAAGAGATTTTTCAAGATCTTTCCATTAAAAACCATCGTCCAAATGTGACGACATACACTATTATGATCAATGGGCTCTGCAAAGAGGGCTTATTTGAAGAAGCATTGGCCCTGCTGTCGGAAATGGAAGACAATGGTTGCTTACCAAATGCTGTGACTTTTGAAACGTTATTCGTGCTTTGCTCCCCAACTGAAGAAAAAGATGAACACGAACCAGAAAGTGGACAAGAGACTCAGGTTGACGAGAATCTCGGTCCTACTTTGCCTCACCACAGAGTTCATCCGAAAGGAAGTTCAAGCAGCCAGCTGGAGCACTCTAAGCCTGTTGAAGGTTTAGGAATAAACCTTCTTCTTGATCCGAAGTTAGCAGCTGTACAACATACACCATCCCAGGTAACATATGGGAAAAATATTCCAGTTGCGGCTGCTGCAGCTGCTGCAGCTGCTGCTGTTGTTGCTTCCTCTATGGTAGCTGCTGTAGCAAAGTCAAACACTGACTCGAACATTGAGCTTCCAGTAGCTGCAGCGGCCACTGCAACTGCTGCAGCTGTAGTAGCAACCACTGCATCTGTCAGAGCAAATTCAGAAGGTGATAGAATATCTGATAGATCTATAGTAAGCAATGACAGTACAAAATCTGATTTTACATTTGATGATGTTGCCGAGTATGACATTCCGTTGGAGGAAATCACACTGGGTGAACGTATCGGACTTGGTATTAACTGTACTTTGCTCTATAAGATTTGGTTACATTCTTTTGTATACCGTGGTGAATGGCGTGGAACAATGAGTTTTATTCCTATTCAGGTTCAAATAATGAAAAGACTGAGGCATCCAAATGTTGTTCTCTTCATGGGAGCAGTTACTCGATGTCCGAATCTTTCTATTGTTACTGAATTTCTTCCCAGAAGTTTGTACAGACTAATTCATCGACCAAACAATCAATTAGATGAGCGAAGGCGGTTGAGGATGGCCCTTGATATTGTAAGATTCTGTTTTGTTTTCTTGCAATGTAGTTTCTTTAAGGCCTGA 2454 0.4099 MLRAASFSRFSFSLHIPSFLVPYVFPFRFPSRSCSMSSLHSHSELTSPRHVDEAVDSFTRMLSMRRTPSIIQFNQILGSLAKTHHFPTTISLFQQLQTRGIAPSIVTMNILINCCCGMGRITLAFSILAKIFRMGFQPNTITLNTLIKGLCLCGNVEKALHFHDRVLAHGFHFDQVTYATLINGLGKTGHTAAAIQVLKKIPRYGTVPNVVIYNTIIDSLCKDTLVSEAFHFYSEMLAKGISPNVITYTTLIFGLCLVGQLKEAIDLLNHMMLKNITPDVRTYNTLIDGLCKEGNIKDAKSVLAVMTKDAVEPTVVTYNCLMDGYCLVNELNKAKCIFDTMARIGMAPNIRSYNIIINGLCKSKLMDDALNLFEEMRRKNLVPNTVTYNTLIDGLGKSGRISCASKLLVEMHNKGQPADIITYNSLLDAMFNIKQLDKALMLFIQMKESGIDPNICTYSILIDGLCKSGRLIDAKEIFQDLSIKNHRPNVTTYTIMINGLCKEGLFEEALALLSEMEDNGCLPNAVTFETLFVLCSPTEEKDEHEPESGQETQVDENLGPTLPHHRVHPKGSSSSQLEHSKPVEGLGINLLLDPKLAAVQHTPSQVTYGKNIPVAAAAAAAAAAVVASSMVAAVAKSNTDSNIELPVAAAATATAAAVVATTASVRANSEGDRISDRSIVSNDSTKSDFTFDDVAEYDIPLEEITLGERIGLGINCTLLYKIWLHSFVYRGEWRGTMSFIPIQVQIMKRLRHPNVVLFMGAVTRCPNLSIVTEFLPRSLYRLIHRPNNQLDERRRLRMALDIVRFCFVFLQCSFFKA* 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1761 817 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 139 173 IPR002885 -
Amo15g1761 817 Pfam PPR repeat 176 205 IPR002885 -
Amo15g1761 817 TIGRFAM PPR: pentatricopeptide repeat domain 421 454 IPR002885 -
Amo15g1761 817 TIGRFAM PPR: pentatricopeptide repeat domain 211 245 IPR002885 -
Amo15g1761 817 TIGRFAM PPR: pentatricopeptide repeat domain 282 314 IPR002885 -
Amo15g1761 817 TIGRFAM PPR: pentatricopeptide repeat domain 246 280 IPR002885 -
Amo15g1761 817 TIGRFAM PPR: pentatricopeptide repeat domain 176 210 IPR002885 -
Amo15g1761 817 TIGRFAM PPR: pentatricopeptide repeat domain 386 416 IPR002885 -
Amo15g1761 817 TIGRFAM PPR: pentatricopeptide repeat domain 141 174 IPR002885 -
Amo15g1761 817 TIGRFAM PPR: pentatricopeptide repeat domain 106 140 IPR002885 -
Amo15g1761 817 TIGRFAM PPR: pentatricopeptide repeat domain 352 385 IPR002885 -
Amo15g1761 817 TIGRFAM PPR: pentatricopeptide repeat domain 316 349 IPR002885 -
Amo15g1761 817 TIGRFAM PPR: pentatricopeptide repeat domain 492 525 IPR002885 -
Amo15g1761 817 TIGRFAM PPR: pentatricopeptide repeat domain 456 490 IPR002885 -
Amo15g1761 817 SUPERFAMILY Protein kinase-like (PK-like) 696 804 IPR011009 -
Amo15g1761 817 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 454 488 IPR002885 -
Amo15g1761 817 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 279 313 IPR002885 -
Amo15g1761 817 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 104 138 IPR002885 -
Amo15g1761 817 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 489 523 IPR002885 -
Amo15g1761 817 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 349 383 IPR002885 -
Amo15g1761 817 Gene3D Tetratricopeptide repeat domain 32 131 IPR011990 GO:0005515
Amo15g1761 817 Gene3D Tetratricopeptide repeat domain 344 412 IPR011990 GO:0005515
Amo15g1761 817 Gene3D Tetratricopeptide repeat domain 132 202 IPR011990 GO:0005515
Amo15g1761 817 Gene3D Tetratricopeptide repeat domain 484 544 IPR011990 GO:0005515
Amo15g1761 817 Gene3D Tetratricopeptide repeat domain 272 343 IPR011990 GO:0005515
Amo15g1761 817 Gene3D Tetratricopeptide repeat domain 413 483 IPR011990 GO:0005515
Amo15g1761 817 Gene3D Tetratricopeptide repeat domain 203 271 IPR011990 GO:0005515
Amo15g1761 817 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 314 348 IPR002885 -
Amo15g1761 817 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 384 418 IPR002885 -
Amo15g1761 817 MobiDBLite consensus disorder prediction 539 579 - -
Amo15g1761 817 Pfam Protein tyrosine and serine/threonine kinase 743 803 IPR001245 GO:0004672|GO:0006468
Amo15g1761 817 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 244 278 IPR002885 -
Amo15g1761 817 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PET309, MITOCHONDRIAL 194 560 - -
Amo15g1761 817 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PET309, MITOCHONDRIAL 51 419 - -
Amo15g1761 817 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 174 208 IPR002885 -
Amo15g1761 817 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 209 243 IPR002885 -
Amo15g1761 817 Gene3D Phosphorylase Kinase; domain 1 692 775 - -
Amo15g1761 817 Pfam PPR repeat family 419 467 IPR002885 -
Amo15g1761 817 Pfam PPR repeat family 208 256 IPR002885 -
Amo15g1761 817 Pfam PPR repeat family 488 535 IPR002885 -
Amo15g1761 817 Pfam PPR repeat family 103 151 IPR002885 -
Amo15g1761 817 Pfam PPR repeat family 348 396 IPR002885 -
Amo15g1761 817 Pfam PPR repeat family 278 326 IPR002885 -
Amo15g1761 817 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 419 453 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1761 Amo-Chr15 118151640 118156265 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1761 189 545 Glycosyltransferase AT1G05670 32.402 1.74e-54 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Amo15g1761 PK_Tyr_Ser-Thr 1.1e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1761 - - ahf:112751113 1304.66