Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1759 ATGTTGCGTGCAGCATCATTCTCCAGGTTCAGCTTCTCTCTTCATATCCCCTCTTTTCTTGTGCCCTATGTTTTCCCTTTTCGCTTTCCTTCCCGTTCATGTTCAATGTCAAGCCTTCACTCTCATTCTCAGCTCACATCCCCTCGCCATGTCGATGAAGCTGTTGATTCCTTCACTCGCATGCTCTCTATGCGTCGCACTCCATCCATTATCCAATTTAACCAGATTTTGGGGTCCCTTGCCAAGACGCACCATTTCCCAACCACCATTTCCCTTTTTCAGCAATTGCAAACCAGGGGAATTGCGCCCAGCATAGTTACTATGAATATTTTAATCAATTGTTGCTGCGGCATGGGTCGGATCACTCTCGCTTTCTCTATATTGGCCAAGATTTTCAGGATGGGTTTTCAGCCAAATACCATAACATTGAATACACTCATTAAAGGTCTCTGTCTCTGTGGTAATGTTGAAAAAGCACTGCACTTTCATGACAGAGTGCTGGCTCATGGATTTCACTTCGACCAAGTCACTTATGCAACTTTGATCAATGGGCTCTGTAAGACCGGACACACAGCAGCTGCTATTCAAGTGTTGAGAAAGATCCCACGGTATGGCACTGTTCCTAATGTCGTCATGTACAACACAATTATTGATAGCCTCTGCAAGGATACACTTGTAAGTGAGGCTTTTCATTTCTATTCTGAAATGCTTGCTAAGGGAATTTCTCCTAATGTGATCACCTATACCACTCTAATTTTTGGATTGTGCCTTGTGGGTCAACTTAAGGAAGCCATTGATTTACTAAATCATATGATGCTGAAAAACATTACTCCAGATGTCCAAACCTATAATACTTTGATTGATGGACTATGTAAGGAGGGAAATATGAAATATGCTAAGAGTGTGTTGGCTGTGATGACAAAAGATGCTGTGGAACCAACTGTGGTTACTTATAATTGTTTAATGGATGGGTATTGCTTGGTTAACGAATTAAACAAGGCAAAATGTATATTTGACACAATGGCCCAGATAGGAATGGCTCCTGATATACAAAGTTACAATATTATTATTAATGGCTTGTGCAAAAGTAAATTGATGGATGATGCCTTGGATCTCTTTGAAGAGATGCGTCGCAAGAACTTGGTTCCTAACACGCTTCTTGTTGAGATGCATAATAAAGGTCAACCTGCTGATATAATCACTTACAGTTCCTTGTTGGATGGGATGTTCAATATCAAGCAACTTGACAAGGCACTTATGTTATTTATTCAGATGAAAGAGAGTGGCATTGATCCAAATATATGCACGTACAGTATACTGATTGATGGCCTATGTAAAAGTGGAAGACTTATGGATGCAAAAGAGATTTTTCAAGATCTTTGCATTAAAAACCATCGTCCAAATGTGAGGACATACACTATTATGATCAATGGGCTCTGTAAAGAGGGCTTATTTGAAGAAGCATTGGCCCTGCTGTCGGAAATGGAAGACAATGGTTGCTTACCAAATGCTGTGACTTTTGAAATCGTTATTCGTGCTTTGTTCGAAAAAGGCTCCCCAACTGAAGAAAAAGATGAACACAAACCAGAAAGTGGACAGGAGACTACTTTACCTCACCACAGAGTTCATCCGAAAGGAAGTTCAAGCAGCCAGCCAGAGCACTCTAAGCCTGTTGAAGGTTTAGGAATAAACCACCTTCTTGATCCGAAGTTAGCAGCTGTACAACATACACCATCCCAGGTAATAGATGGGAAAAATATTCCAGTTGCGGCGGCTGCAGCAGCAGCTGCTGCTGTTGTTGCTACCTCTATGGTAGCTGCTGTAGCAAAGTCAAACACTGACTCGAACATTGAGCTTTCAGTAGCTGCAGCGGCCACTGCAACTGCTGCAGCTGTAGTAGCAACCACTGCAGCTGTCAGCAAACAGTATGAGCAAGGCAGTCGAAGTGACGGACACATGGATGGCACTGCTTATGAGCCGAAGGGTAGTGGTGATGGTGAGAATATTGTGGTAGGAGCAAATTCAGGTGATAGAATATCTGATAGATCTATAGTAAGCAATGACAGTATAAAATCTGATTTTATATTAGATGATGTTGCCAAATATGACATTCCGTTGGAGGAAATTACACTGGCTGAACGTATCGGACTTGGATCGTATGGGGAGGTATACCGTGGTAAATGGCGTGGAACAGAAGTTGCTGTAAAAAGATTTCTTGATCAAGATATATCTGGTGAATCACTTGAAGAATTCAAAAGTGAGGTTCAAATAATGAAAAGACTGAGGCATCCAAATGTTGTTCTCTTCATGGGAGCAGTTACTCGACCTCCGATGCTTTCTATTGTTACTGAATTTCTTCCCAGAGGAAGTTTGTACAGACTAATTCATCGACCAAACAATCAATTAGATGAGTGA 2415 0.4149 MLRAASFSRFSFSLHIPSFLVPYVFPFRFPSRSCSMSSLHSHSQLTSPRHVDEAVDSFTRMLSMRRTPSIIQFNQILGSLAKTHHFPTTISLFQQLQTRGIAPSIVTMNILINCCCGMGRITLAFSILAKIFRMGFQPNTITLNTLIKGLCLCGNVEKALHFHDRVLAHGFHFDQVTYATLINGLCKTGHTAAAIQVLRKIPRYGTVPNVVMYNTIIDSLCKDTLVSEAFHFYSEMLAKGISPNVITYTTLIFGLCLVGQLKEAIDLLNHMMLKNITPDVQTYNTLIDGLCKEGNMKYAKSVLAVMTKDAVEPTVVTYNCLMDGYCLVNELNKAKCIFDTMAQIGMAPDIQSYNIIINGLCKSKLMDDALDLFEEMRRKNLVPNTLLVEMHNKGQPADIITYSSLLDGMFNIKQLDKALMLFIQMKESGIDPNICTYSILIDGLCKSGRLMDAKEIFQDLCIKNHRPNVRTYTIMINGLCKEGLFEEALALLSEMEDNGCLPNAVTFEIVIRALFEKGSPTEEKDEHKPESGQETTLPHHRVHPKGSSSSQPEHSKPVEGLGINHLLDPKLAAVQHTPSQVIDGKNIPVAAAAAAAAAVVATSMVAAVAKSNTDSNIELSVAAAATATAAAVVATTAAVSKQYEQGSRSDGHMDGTAYEPKGSGDGENIVVGANSGDRISDRSIVSNDSIKSDFILDDVAKYDIPLEEITLAERIGLGSYGEVYRGKWRGTEVAVKRFLDQDISGESLEEFKSEVQIMKRLRHPNVVLFMGAVTRPPMLSIVTEFLPRGSLYRLIHRPNNQLDE* 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1759 804 Pfam Protein tyrosine and serine/threonine kinase 709 801 IPR001245 GO:0004672|GO:0006468
Amo15g1759 804 MobiDBLite consensus disorder prediction 643 674 - -
Amo15g1759 804 Gene3D Phosphorylase Kinase; domain 1 702 786 - -
Amo15g1759 804 Gene3D Tetratricopeptide repeat domain 463 525 IPR011990 GO:0005515
Amo15g1759 804 Gene3D Tetratricopeptide repeat domain 387 462 IPR011990 GO:0005515
Amo15g1759 804 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 104 138 IPR002885 -
Amo15g1759 804 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 468 502 IPR002885 -
Amo15g1759 804 ProSitePatterns Protein kinases ATP-binding region signature. 715 736 IPR017441 GO:0005524
Amo15g1759 804 Gene3D Tetratricopeptide repeat domain 190 297 IPR011990 GO:0005515
Amo15g1759 804 Gene3D Tetratricopeptide repeat domain 32 189 IPR011990 GO:0005515
Amo15g1759 804 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 244 278 IPR002885 -
Amo15g1759 804 SUPERFAMILY HCP-like 149 431 - -
Amo15g1759 804 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 44 521 - -
Amo15g1759 804 ProSiteProfiles Protein kinase domain profile. 709 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo15g1759 804 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 139 173 IPR002885 -
Amo15g1759 804 SUPERFAMILY Protein kinase-like (PK-like) 692 800 IPR011009 -
Amo15g1759 804 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 349 383 IPR002885 -
Amo15g1759 804 MobiDBLite consensus disorder prediction 519 541 - -
Amo15g1759 804 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 209 243 IPR002885 -
Amo15g1759 804 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 314 348 IPR002885 -
Amo15g1759 804 MobiDBLite consensus disorder prediction 519 561 - -
Amo15g1759 804 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 174 208 IPR002885 -
Amo15g1759 804 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 398 432 IPR002885 -
Amo15g1759 804 TIGRFAM PPR: pentatricopeptide repeat domain 246 280 IPR002885 -
Amo15g1759 804 TIGRFAM PPR: pentatricopeptide repeat domain 282 314 IPR002885 -
Amo15g1759 804 TIGRFAM PPR: pentatricopeptide repeat domain 471 504 IPR002885 -
Amo15g1759 804 TIGRFAM PPR: pentatricopeptide repeat domain 435 469 IPR002885 -
Amo15g1759 804 TIGRFAM PPR: pentatricopeptide repeat domain 176 210 IPR002885 -
Amo15g1759 804 TIGRFAM PPR: pentatricopeptide repeat domain 400 434 IPR002885 -
Amo15g1759 804 TIGRFAM PPR: pentatricopeptide repeat domain 106 140 IPR002885 -
Amo15g1759 804 TIGRFAM PPR: pentatricopeptide repeat domain 141 174 IPR002885 -
Amo15g1759 804 TIGRFAM PPR: pentatricopeptide repeat domain 316 348 IPR002885 -
Amo15g1759 804 TIGRFAM PPR: pentatricopeptide repeat domain 211 245 IPR002885 -
Amo15g1759 804 TIGRFAM PPR: pentatricopeptide repeat domain 352 385 IPR002885 -
Amo15g1759 804 Pfam PPR repeat family 208 256 IPR002885 -
Amo15g1759 804 Pfam PPR repeat family 398 446 IPR002885 -
Amo15g1759 804 Pfam PPR repeat family 103 151 IPR002885 -
Amo15g1759 804 Pfam PPR repeat family 467 514 IPR002885 -
Amo15g1759 804 Pfam PPR repeat family 278 326 IPR002885 -
Amo15g1759 804 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 279 313 IPR002885 -
Amo15g1759 804 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 433 467 IPR002885 -
Amo15g1759 804 Gene3D Tetratricopeptide repeat domain 298 386 IPR011990 GO:0005515
Amo15g1759 804 PANTHER OS10G0495100 PROTEIN 44 521 - -
Amo15g1759 804 Pfam PPR repeat 345 377 IPR002885 -
Amo15g1759 804 Pfam PPR repeat 170 200 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1759 Amo-Chr15 118117072 118121565 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1759 53 561 Glycosyltransferase AT1G05670 29.608 1.28e-72 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Amo15g1759 PK_Tyr_Ser-Thr 2e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1759 - - ahf:112751113 1263.44