Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1758 ATGGCTCTTGATACTGCCCGAGGAATGAACTATTTGCACAACTGCACTCCAGTGATTGTACACCGTGATTTGAAGTCACCAAATCATCTTGTTGATAAAAATTGGGTTGTGAAGGTATGTGATTTTGGCTTATCAAGAATGAAGCATAGTACATTCCTTTCTTTCAGATCACTGCAGGAACTGTAA 186 0.3925 MALDTARGMNYLHNCTPVIVHRDLKSPNHLVDKNWVVKVCDFGLSRMKHSTFLSFRSLQEL* 62
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1758 61 Gene3D Transferase(Phosphotransferase) domain 1 1 60 - -
Amo15g1758 61 ProSiteProfiles Protein kinase domain profile. 1 61 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo15g1758 61 SUPERFAMILY Protein kinase-like (PK-like) 1 53 IPR011009 -
Amo15g1758 61 Pfam Protein tyrosine and serine/threonine kinase 1 48 IPR001245 GO:0004672|GO:0006468
Amo15g1758 61 PANTHER PUTATIVE, EXPRESSED-RELATED 1 56 - -
Amo15g1758 61 PANTHER SERINE-THREONINE PROTEIN KINASE 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1758 Amo-Chr15 118116670 118117059 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1758 1 57 MAP Kinase Kinase Kinase AT1G73660 85.965 9.44e-32 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Amo15g1758 PK_Tyr_Ser-Thr 3.4e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1758 - - gmx:100788742 116.316